Rhodococcus sp. H-CA8f: CPI83_14210
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Entry
CPI83_14210 CDS
T10533
Symbol
pafA
Name
(GenBank) Pup--protein ligase 2
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
rhoh Rhodococcus sp. H-CA8f
Brite
KEGG Orthology (KO) [BR:
rhoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rhoh03051
]
CPI83_14210 (pafA)
Enzymes [BR:
rhoh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
CPI83_14210 (pafA)
Proteasome [BR:
rhoh03051
]
Prokaryotic proteasome
Bacterial regulatory particles
CPI83_14210 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
ATI33065
LinkDB
All DBs
Position
3037452..3038795
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AA seq
447 aa
AA seq
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MGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGSHPEYA
TAECDSLIQLVNHDRAGERVLEELLIDAEARLAEEGIGGDIYLFKNNTDSAGNSYGCHEN
FLVARAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVSSATTR
SRPIINTRDEPHADAEKYRRLHVIVGDSNMAETTTMLKVGSAALVLEMIEAGVSFRDFAL
DNPIRAIREVSHDVTGKKPVRLAGGRQASALDIQREYHAKAVEHLRNREPDPQVEQVVDL
WGRTLDAVEAQDFAKVDTEIDWVIKRKLFQRYQDRHGFDLSDPKIAQLDLAYHDIKRGRG
VFDVLQRKGLVKRVTEDETIDDAVENPPQTTRAKLRGDFITAAQAAGRDFTVDWVHLKLN
DQAQRTVLCKDPFRSVDERVERLIASM
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcgagacggaattcggcgttacctgcacctttcacgggcacaggcgactgagc
cccgacgaggttgctcgttacctcttccgtcgtgtcgtgtcgtggggtcgcagctccaat
gtcttcctccgtaacggagcccgcttgtacctggatgtgggttcgcacccggagtacgcg
accgcagagtgcgacagcctcatccagttggtcaatcacgaccgtgccggtgagcgagtg
ctcgaagaactgctgatcgacgccgaggcgagactcgccgaggaggggatcggcggcgac
atctacctcttcaagaacaacaccgactcggccggaaactcgtacggatgccacgagaac
tttctcgtcgcgcgcgccggtgagttctcccgcatttcggatgtcttgttgccgttcctc
gtcacgcgccagttgatctgcggcgccggcaaggtgctgcagactcccaaggccgcgacg
ttctgcctctcgcagcgcgcggaacacatctgggaaggtgtctcgtcggcgaccactcgc
tcgcgtccgatcatcaacacccgcgacgaaccgcatgccgacgccgagaagtaccgccga
ctgcacgtgatcgtcggcgattcgaacatggccgaaacaacgacgatgctcaaggtcggt
tctgcagcactcgtgctcgagatgatcgaagccggggtttcgttccgcgatttcgctttg
gacaacccgattcgtgccatccgcgaggtcagccacgacgtgacgggtaaaaagcctgtc
cgtctagctggtggtcgtcaggccagtgccctcgatattcaacgcgaataccacgccaag
gcagtcgaacacctgcgtaaccgcgaaccggacccgcaggtcgagcaggtagtcgacctg
tggggtcgcaccctcgatgccgtcgaagctcaggattttgcgaaggtcgacacggagatc
gactgggtcatcaagcgcaagctgttccagcgttaccaggaccgtcacggtttcgacctg
tccgatcccaagatcgcgcagctcgacttggcgtaccacgacatcaaacgcggccggggt
gtcttcgacgtgctgcagcgcaagggcttggtcaagcgggtcaccgaggacgagacgatc
gacgatgccgtcgagaatccgccgcagaccacgcgcgccaaattgcgaggcgacttcatc
actgcagcccaggccgcaggcagggacttcacggtcgactgggttcacctcaagctcaac
gaccaggcgcagagaacggtgctgtgcaaggatccgttccgttccgtcgacgagcgtgtc
gagcgtttgatcgcttcgatgtag
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