Rhodococcus sp. H-CA8f: CPI83_14935
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Entry
CPI83_14935 CDS
T10533
Name
(GenBank) RNase adaptor protein RapZ
KO
K06958
RNase adapter protein RapZ
Organism
rhoh Rhodococcus sp. H-CA8f
Brite
KEGG Orthology (KO) [BR:
rhoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhoh03019
]
CPI83_14935
Messenger RNA biogenesis [BR:
rhoh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CPI83_14935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
SKI
Motif
Other DBs
NCBI-ProteinID:
ATI33197
LinkDB
All DBs
Position
complement(3233605..3234471)
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AA seq
288 aa
AA seq
DB search
MDFLLVTGLSGAGLSTAAKVLEDLGWYVADNLPPELISRMVGLSLTSDPPVDRLAVVIDV
RSRLFTGDLGWVLTELEAEPIHTRVLYLEASDDVLIRRFEQVRRSHPLQNDGIDGTLSEG
IAAERRQLAVVKAAADLVIDTSALKAHQLRQKIETAFGNDANRTMKVTVQSFGFKYGLPM
DADLVCDVRFLPNPHWIPELRPHTGQDADVRDYVLSREGAEDYLDTYRHLVDLTIAGYRR
EGKRYMTIAVGCTGGKHRSVAMSEALARRLGSEDDISVSIVHRDLGRE
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctgctggtgacgggattgtccggagccggtttgagtaccgctgccaaggtg
ctcgaagacctcggctggtatgtcgcggacaatttgccacctgagctcatttcccggatg
gtcggtctgagcttgacctccgatccgccggtcgatcgtctcgccgtcgtgatcgacgtg
cggagtcgactcttcaccggcgatctcgggtgggtgctcaccgaactcgaggcggagccg
atccacactcgggtgctgtacctcgaagcgtccgacgacgtgttgatccgacggttcgaa
caggttcgccgcagtcatccgttgcagaacgacggcatcgacggcacgttgtccgaaggg
atcgcagccgagcgtcggcagttggccgtggtgaaggcggccgccgatctggtcattgac
acgtcggcgctgaaggcacatcagttgcgtcagaagatcgaaacggcgttcgggaacgat
gccaaccgcacgatgaaggtgacggtccagtcgttcggattcaagtacggcctgccgatg
gacgccgatctcgtctgtgacgttcgattcctgcccaatccccactggatccctgaactt
cgcccgcacaccggtcaggatgccgacgtccgcgactacgtgttgtcccgcgagggcgcg
gaagactacctagacacctaccgacatctggtcgatttgacgatcgccggatatcggcga
gaaggaaagcgctacatgacaattgcggtcgggtgcaccggcggtaagcaccgaagcgtg
gccatgtccgaagctctcgcgaggcgtttgggttccgaggacgacatctcggtcagcatc
gtgcaccgggatctggggcgcgaatga
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