Rhodococcus sp. H-CA8f: CPI83_15890
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Entry
CPI83_15890 CDS
T10533
Name
(GenBank) RNA polymerase subunit sigma
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
rhoh Rhodococcus sp. H-CA8f
Brite
KEGG Orthology (KO) [BR:
rhoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhoh03021
]
CPI83_15890
Transcription machinery [BR:
rhoh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CPI83_15890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ATI33366
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Position
3421971..3422942
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AA seq
323 aa
AA seq
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MTSPSTTTRIRPSAADLDAQSPAADLVRVYLNGIGRTALLTAADEVELAKRIEAGLYASH
VLATGKRLTVAKKRDLATIVREGQSARSHLLEANLRLVVSLAKRYTGRGMPLLDLIQEGN
LGLIRAMEKFDYAKGFKFSTYATWWIRQAITRGMADQSRTIRLPVHLVEQVNKLARIKRE
LHQQLGREATDDELAEESGIPAHKIADLLDHSRDPVSLDMPVGNDEEAPLGDFIEDSEAT
SAENAVIAGLLHSDVRSVLGTLDEREQQVIRLRYGLDDGQPRTLDQIGKLFGLSRERVRQ
IEREVMGKLRVGDRAEKLRSYAS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgacaagccccagcaccactactcgcattcgtccgagcgccgcagatctggacgcccag
agcccggccgcagacctggtccgcgtctacctgaacgggatcggtcgtactgcactgctg
acagcagcagacgaggtcgaactggcgaagcgaatcgaagcggggctgtacgccagccac
gtccttgccacgggaaagcgcctgacagtcgccaagaagagggatctcgcaacgatcgtt
cgcgagggacagtcggcgcgtagccacctcctggaagcgaacctgcgactcgtcgtgtcg
ctggccaagcgctacaccggccgcggaatgccgctcctcgatctcattcaagaaggcaac
ctcggactcatccgtgccatggagaagttcgactacgccaagggcttcaagttctcgacg
tacgccacctggtggatccgtcaggcgatcacccgcggaatggctgatcagagccgcacc
atccggctcccagtccacctcgtggagcaggtcaacaagctcgcccgcatcaagcgtgaa
ctgcaccagcagctcgggcgcgaagcgacggacgacgagttggccgaagagtcgggcatc
ccggcgcacaagatcgcggacctgctcgaccacagccgcgacccggtaagcctggacatg
cccgtcggtaacgacgaagaagcacccttgggcgacttcatcgaagattccgaggcgact
tcggcggagaacgccgtcatcgccggtctgctgcacagcgatgtgcgcagcgtgctcggg
acgctcgacgagcgcgagcagcaggtcatccgacttcgctacggtctcgacgacggccag
cctcgcacactcgatcagatcggcaagctcttcggcctctcgcgtgagcgggttcgtcag
atcgagcgtgaggtcatgggcaagctccgcgtcggcgatcgcgccgagaaactgcgttcc
tacgcgagctga
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