Rhodococcus sp. H-CA8f: CPI83_16085
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Entry
CPI83_16085 CDS
T10533
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rhoh Rhodococcus sp. H-CA8f
Pathway
rhoh00300
Lysine biosynthesis
rhoh00470
D-Amino acid metabolism
rhoh01100
Metabolic pathways
rhoh01110
Biosynthesis of secondary metabolites
rhoh01120
Microbial metabolism in diverse environments
rhoh01230
Biosynthesis of amino acids
Module
rhoh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhoh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CPI83_16085
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CPI83_16085
Enzymes [BR:
rhoh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CPI83_16085
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GFIT
Motif
Pfam:
DAP_epimerase
CusF_Ec
Motif
Other DBs
NCBI-ProteinID:
ATI35940
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Position
complement(3468289..3469158)
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AA seq
289 aa
AA seq
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MDFSKGHGTQNDFVVLPDLDVRVDLEPARVSALCDRQRGLGADGILRVARAGALADAGVL
GALPDGVAAEDWFMDYRNSDGSIAEMCGNGVRVFAHYLKASGLESKDEFVVGSRAGARPV
VVHGYDATHGDVTVAMGPIKDLGTSSATIDGRVFAGVGIDVGNPHLACVDEHVTAEVLSA
LDLSVSPGFDPGFFPHGVNIEIVTPIHDGGVHMRVHERGVGETRSCGTGTVAAAAAALKF
DGRDEGSVLVRVLGGEVQVTVEGGEGSLRGPSVLVANGTISDVWWQSLV
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatttcagtaagggccacggcacgcagaacgacttcgttgttctccctgacctcgac
gttcgggtcgatctcgagccggcgcgagtttcagcgttgtgtgatcgtcagcgtggcctc
ggcgccgacggcatccttcgtgttgcccgggcaggcgcacttgcggacgcgggcgtgctc
ggtgcgctgcccgacggcgtcgctgccgaagactggttcatggactaccgcaacagcgac
ggctccatcgcggagatgtgcggaaacggagttcgcgtattcgcccactatctcaaggcc
tcgggcttggagagcaaggacgagttcgtggtcggcagtcgtgccggagcgcgtccggtc
gtggtgcacggctacgacgccacacatggtgacgtgaccgtggcgatgggcccgatcaag
gacctcggcaccagttcggcaacaatcgacggccgcgtcttcgccggcgtcggcatcgac
gtcggtaatccgcatttggcgtgtgtcgacgagcacgtgacggcagaagttttgagtgcg
ctcgatttgagtgtttctccgggcttcgatcccgggttcttcccgcacggggtcaacatc
gagatcgtgacgccgatccacgacggtggggtccacatgcgcgtacacgagcgtggtgtg
ggcgagactcgttcctgcggaaccggaacggtcgcagctgcggccgcggcgctgaagttc
gacggccgcgacgaaggctcggtgctggtgcgcgtgctcggcggcgaagtgcaggtcacc
gtcgaaggcggcgaagggtcgttgcgggggccctcggttctggtggcgaacgggacgatc
agcgatgtctggtggcaatcgctcgtgtga
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