Rhodococcus sp. H-CA8f: CPI83_16115
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Entry
CPI83_16115 CDS
T10533
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rhoh Rhodococcus sp. H-CA8f
Brite
KEGG Orthology (KO) [BR:
rhoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhoh03016
]
CPI83_16115
Enzymes [BR:
rhoh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CPI83_16115
Transfer RNA biogenesis [BR:
rhoh03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CPI83_16115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ATI35941
LinkDB
All DBs
Position
complement(3473836..3475383)
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AA seq
515 aa
AA seq
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MSPALPEPTAVPEATATPVRTYEVRTYGCQMNVHDSERLSGLLEDAGYSKAETGTDPDLV
VFNTCAVRENADNKLYGNLSQLAPNKEANPDMQIAVGGCLAQKDRDTVVKKAPFVDVVFG
THNIGSLPALLDRARHNQRAEVEILDALEAFPSTLPAKRESAYAGWVSISVGCNNTCTFC
IVPALRGKEVDRRPGDILAEVQALVDEGVSEVTLLGQNVNAYGVSFADPEQPRDRGAFAS
LLKACGHIDGLERVRFTSPHPAEFTDDVIEAMATTPNVCPQLHMPLQSGSDKVLKAMKRS
YRKSKYLGIIEKVRAAMPHAAITTDIIVGFPGETEEDFEETLDVVRKARFSNAYTFQYSK
RPGTPAAEMADQLPKEVVQERYMRLLAVQEEVNIEENRKLVGTEVELLVAAGEGRKNAAT
HRLSGRARDGRLVHFRPEGNLDGTIRPGDVVTVVVTHGAPHHLVADDGVLTHRRTRAGDS
FEKGITPKTPPIGVGLGLPKIGAPAPQPVQMGCNA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctgcacttccggagccgactgcagttccggaggcaactgctacgcctgttcgc
acctacgaggtgcggacgtacggctgtcagatgaacgtccacgattccgagcgactgtcc
ggtctgctcgaggacgccgggtattcgaaggcggagaccggaaccgatcctgatcttgtc
gtcttcaatacgtgtgcggtccgcgagaacgcggacaacaagttgtacggcaacctcagc
cagctcgcccccaacaaggaggcgaaccccgacatgcagatcgcggtcggtgggtgcctg
gcgcagaaggatcgtgacaccgtcgtcaagaaggcgccgttcgtcgatgtcgtcttcggc
actcacaacatcggctcgctgcccgcgctgctcgaccgcgcgcgccacaatcagcgcgcc
gaagtcgaaatcctcgacgcgctggaggcgtttccgtcgacactgccagccaagcgcgaa
tccgcctacgcgggttgggtttccatctcggtgggctgtaacaacacgtgcacgttctgc
atcgttccggccttgcgtggcaaggaagtggatcgacgtcccggcgacattctggccgag
gtgcaggcactcgtcgacgagggtgtctcggaagtgaccctgctcggacagaacgtcaac
gcctacggcgtgtcgttcgccgatccggaacaaccgcgcgatcgcggagccttcgcctcc
ctcttgaaggcatgtggacacatcgacggcctcgaacgggtcaggttcacatcgccgcac
ccggcagagttcaccgatgacgtcatcgaagctatggcaaccactcccaacgtctgcccg
caactgcacatgccgttgcagtccggttcggacaaggttctcaaggcgatgaagcgctcg
taccgcaagtcgaagtacctcgggatcatcgagaaggtgcgcgccgcaatgccgcacgcc
gccatcaccacggacatcatcgtcgggttcccgggggagacggaagaggatttcgaggag
acgctggacgtcgtgcgtaaggcgcgattctccaacgcctacaccttccagtactccaag
cgcccgggcacgccggcggcggagatggctgatcaacttcccaaagaggttgtccaggaa
cgctacatgcgattgctcgcggttcaggaagaagtgaacatcgaggaaaatcgcaaactc
gtcggcaccgaggtagaactactggtggccgcgggggagggccgcaagaacgcagcgact
caccgtctcagtggtcgcgcgcgagacggccgcctggtgcatttccgacccgaaggaaac
ctcgacggcacaatccgacccggcgacgtggtgacggtcgtcgtcacccacggagccccc
catcacctcgtggcagatgacggagtgctcacacaccgtcggacccgcgccggtgattcg
ttcgaaaagggcatcacacccaagaccccgcccatcggcgtaggtctcggactaccgaag
atcggtgccccagccccacaacccgtccagatgggatgcaacgcatga
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