Rhodococcus sp. H-CA8f: CPI83_16685
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Entry
CPI83_16685 CDS
T10533
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rhoh Rhodococcus sp. H-CA8f
Brite
KEGG Orthology (KO) [BR:
rhoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhoh03016
]
CPI83_16685
Enzymes [BR:
rhoh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CPI83_16685
Transfer RNA biogenesis [BR:
rhoh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CPI83_16685
Prokaryotic type
CPI83_16685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ATI33500
LinkDB
All DBs
Position
complement(3596205..3597125)
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AA seq
306 aa
AA seq
DB search
MSAREKPSSGLVGAGILIVDKEAGITSHDVVARCRKLLNTRKVGHAGTLDPMATGVLVLG
VERATKLLGLLALTTKAYSATIRLGAATDTDDAEGEVLTSADASQVTDAEIAAIVATLTG
DIKQIPASVSAIKVDGQRAHALVRAGETVELAPRPVTVSTFEVLARRDVPGGFVDLDVDV
ECSSGTYIRSLARDLGRELGVGGHLTALRRTRVGPFTLEHARTLEDLAEQPGVSLDIDQA
AQTAFPHRQITAEEAEAISQGRWLEPIGMKGICAAIDPTGHTIALLQEKGRRASSVMVVR
PATLRG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagctcgtgaaaagccttcctccggtcttgtcggcgccggaatcctgattgtcgac
aaagaggcgggcatcaccagccacgacgtggtcgctcggtgccgcaaattgttgaacacc
cgcaaggtgggacatgccgggactcttgatcccatggcgaccggcgtcctcgttctcggc
gtcgagcgtgcgaccaagttgctcggactcctggcactgacaaccaaggcgtactcggcg
accattcgcctcggtgcagcgacggacacggacgatgccgaaggggaggtcctgacttcc
gcagacgcttcgcaggtgacggacgcggagatcgctgccatcgtggcaacgctgaccgga
gacatcaagcagatcccggcaagcgtgagcgctatcaaggtcgacggtcaacgcgcacat
gccctggtgcgtgcgggagaaaccgtcgagctggcgccgcgcccggtaacggtgtcgact
ttcgaagttctggctcggcgagatgtccctggtggcttcgtcgatctggatgtagacgtt
gagtgctcttccggaacatacatccgctcgcttgcacgcgacctcggtcgtgaattgggc
gtcggtggtcatctgacggcattgcgccgcacccgcgtcgggccgttcactctcgaacat
gcgcgcacgctcgaagatctcgcggaacagccgggtgtgagcctcgacatcgatcaggcc
gcgcagacggcttttccgcatcggcagatcacggcggaggaagccgaggcgatcagccag
gggcgctggctcgagccgatcgggatgaaggggatctgtgcggcgatcgatcccaccggt
cacacgattgcgcttctgcaggagaagggtcgacgcgccagttcggtgatggtcgtgcga
ccggcgacgcttcgcgggtga
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