KEGG   Rhodococcus sp. H-CA8f: CPI83_17500
Entry
CPI83_17500       CDS       T10533                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
rhoh  Rhodococcus sp. H-CA8f
Brite
KEGG Orthology (KO) [BR:rhoh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rhoh03032]
    CPI83_17500
   03036 Chromosome and associated proteins [BR:rhoh03036]
    CPI83_17500
   03400 DNA repair and recombination proteins [BR:rhoh03400]
    CPI83_17500
DNA replication proteins [BR:rhoh03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CPI83_17500
Chromosome and associated proteins [BR:rhoh03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CPI83_17500
DNA repair and recombination proteins [BR:rhoh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CPI83_17500
SSDB
Motif
Pfam: Bac_DNA_binding HC2 HU-CCDC81_bac_2 HU-HIG HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: ATI33644
LinkDB
Position
complement(3764495..3765181)
AA seq 228 aa
MNKAELIDVLTEKLGSDRRTATDAVEHVVDTIVRAVHRGESVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVIAGGQKLPATGPAVKRGVAAPATKAAAKKAAA
KKTAAKKAPAKKAPAKTAAKKTVAAKAPAKKAPAKTAAKKTVATKAPAKKAPAKTAAKKT
VATKAPAKKAPAKTAAKAPAKKAPAKKAPAKTAAKKAPAKKAPAKRGK
NT seq 687 nt   +upstreamnt  +downstreamnt
atgaacaaggcagagctcatcgatgttctgactgaaaagctgggttcggacaggcgcaca
gcgaccgacgcagtggagcacgtcgtggacaccatcgtccgcgccgtccaccgtggcgag
agcgtgaccatcaccggcttcggagtcttcgagcagcgtcgtcgtgcagcacgtgttgca
cgcaacccgcgtacgggcgagaccgtcaaggtcaagccgacgtcggttccggctttccgt
ccgggtgcgcagttcaaggctgttatcgctggtggacagaagcttccggccaccggcccg
gcagtcaagcgtggcgtagcagcaccggccaccaaggctgcagccaagaaggctgctgcc
aagaagaccgcagccaagaaggctccggcaaagaaggctccggccaagaccgcagccaag
aagacggttgccgcgaaggctcccgccaagaaggctccggccaagaccgcagccaagaag
acggttgccaccaaggctcccgccaagaaggctccggccaagaccgcagccaagaagacg
gttgccaccaaggctcccgccaagaaggctccggccaagaccgcagccaaggctccggcc
aagaaggctccggccaagaaggctccggccaagaccgcagccaagaaggctccggccaag
aaggctccggccaagcgcggaaagtag

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