Rhodococcus sp. H-CA8f: CPI83_17500
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Entry
CPI83_17500 CDS
T10533
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rhoh Rhodococcus sp. H-CA8f
Brite
KEGG Orthology (KO) [BR:
rhoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhoh03032
]
CPI83_17500
03036 Chromosome and associated proteins [BR:
rhoh03036
]
CPI83_17500
03400 DNA repair and recombination proteins [BR:
rhoh03400
]
CPI83_17500
DNA replication proteins [BR:
rhoh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CPI83_17500
Chromosome and associated proteins [BR:
rhoh03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CPI83_17500
DNA repair and recombination proteins [BR:
rhoh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CPI83_17500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ATI33644
LinkDB
All DBs
Position
complement(3764495..3765181)
Genome browser
AA seq
228 aa
AA seq
DB search
MNKAELIDVLTEKLGSDRRTATDAVEHVVDTIVRAVHRGESVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVIAGGQKLPATGPAVKRGVAAPATKAAAKKAAA
KKTAAKKAPAKKAPAKTAAKKTVAAKAPAKKAPAKTAAKKTVATKAPAKKAPAKTAAKKT
VATKAPAKKAPAKTAAKAPAKKAPAKKAPAKTAAKKAPAKKAPAKRGK
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagagctcatcgatgttctgactgaaaagctgggttcggacaggcgcaca
gcgaccgacgcagtggagcacgtcgtggacaccatcgtccgcgccgtccaccgtggcgag
agcgtgaccatcaccggcttcggagtcttcgagcagcgtcgtcgtgcagcacgtgttgca
cgcaacccgcgtacgggcgagaccgtcaaggtcaagccgacgtcggttccggctttccgt
ccgggtgcgcagttcaaggctgttatcgctggtggacagaagcttccggccaccggcccg
gcagtcaagcgtggcgtagcagcaccggccaccaaggctgcagccaagaaggctgctgcc
aagaagaccgcagccaagaaggctccggcaaagaaggctccggccaagaccgcagccaag
aagacggttgccgcgaaggctcccgccaagaaggctccggccaagaccgcagccaagaag
acggttgccaccaaggctcccgccaagaaggctccggccaagaccgcagccaagaagacg
gttgccaccaaggctcccgccaagaaggctccggccaagaccgcagccaaggctccggcc
aagaaggctccggccaagaaggctccggccaagaccgcagccaagaaggctccggccaag
aaggctccggccaagcgcggaaagtag
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