Rhodococcus sp. H-CA8f: CPI83_18180
Help
Entry
CPI83_18180 CDS
T10533
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhoh Rhodococcus sp. H-CA8f
Pathway
rhoh03420
Nucleotide excision repair
rhoh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPI83_18180
03430 Mismatch repair
CPI83_18180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoh03400
]
CPI83_18180
Enzymes [BR:
rhoh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPI83_18180
DNA repair and recombination proteins [BR:
rhoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPI83_18180
MMR (mismatch excision repair)
Other MMR factors
CPI83_18180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
C1_1
Motif
Other DBs
NCBI-ProteinID:
ATI33757
LinkDB
All DBs
Position
complement(3904735..3906873)
Genome browser
AA seq
712 aa
AA seq
DB search
MMVPMPADTGLDPEQSAAVLAPRGPVCVLAGAGTGKTRTITRRIAHLVADGHVSAGQVLA
VTFTARAAGEMRGRLRELGVGGSGPQVQARTFHAAALRQLKYFWPQVIGDTPWRLLDRKF
AVVSSAAARVGLSTSTESVRDLASEIEWSKASLIAPEDYPRAIAKIHREAPVDATKVAQV
YAAYEELKARGQDGMLLDFDDLLLHTAAALEEHSTVADEFRERYRCFVVDEYQDVTPLQQ
RVLDAWLGDRDDLTVVGDANQTIYSFTGATPNYLLDFSRKFPEATVVRLERDYRSTPEVV
SLANRVIGAARGRIAGTRLQLIGQRAPGPEPEFMEFDDEPAEALGVARAIKRLIAAGTPA
AEIAVLYRINAQSEVHEQALTKLGIPFQVRGGEGFFTRTEVRQAVAALRQAAGRDDLPEG
ADNGEALVSLVRAVLAPLGLTNEEPSGTQARERWASLSALVALTEEQLVHEPELSLSGLL
QELTARAEARHPPTVQGVTLASLHAAKGLEWDAVFLVGLNDGTLPIQHVLGDANSGADDV
AVEEERRLLYVGVTRAREHLQLSWALARNEGGRKSRRRSRFLNGLIPEDSPASRVAAPSS
GNKKRPRCRVCGKPLIGTSATMLGRCEKCPSNVDLELLEHLKAWRLDKSRELKVPAYVVF
SDNTLMAIAEQRPQDNRGLVSIPGIGPKKLDNFGEDVLAVIRGELRAATLDI
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgatggtccccatgcctgcggacaccggactggatccagaacaatcggccgccgtgctc
gcgccacgcggcccggtatgtgtcctcgcgggcgctggaacaggcaaaacccgcaccatt
acccgccggatcgcgcatctggttgccgacggtcatgtctccgccggccaggtgcttgcc
gtgacattcacagcgcgagcggccggcgaaatgcgtggacggcttcgtgagctgggggtt
ggtggaagtgggccgcaggtacaggctcgcaccttccacgccgccgctcttcgtcaactc
aagtacttctggccgcaggtgatcggtgacacgccgtggcgtctgctcgatcggaagttc
gcggttgtcagcagtgccgccgctcgtgtcgggttgtccaccagtacggaaagcgtgcgc
gacctcgccagcgaaatcgagtggtccaaggcctcactgatcgctcccgaggactaccca
cgcgcgatagccaagattcatcgcgaggcgccggtcgatgccaccaaggttgcgcaggtc
tacgcggcatacgaagagctgaaggcacgtggccaggacggcatgctcctcgatttcgac
gatctcctactacacaccgcggctgcgctcgaagagcattcgacggttgccgacgagttc
cgcgaacggtaccgctgcttcgtggtcgacgagtatcaggacgtcaccccgctgcaacag
cgtgtgctcgacgcctggctcggcgaccgcgacgacctgaccgtggtgggcgatgcgaat
cagaccatctactccttcaccggcgccaccccgaactatctgttggacttctcgcggaaa
ttccccgaagcgaccgtcgtccggctcgaacgggactaccgctccacccctgaggtcgtg
tcgctggcgaaccgcgtgatcggtgcagcgcgcggacggatcgccgggacgcgtcttcaa
ttgatcgggcaacgcgctccggggcctgagccggagttcatggagttcgacgacgagcct
gccgaagcgctcggcgttgcgcgggcgatcaaacggctgatcgcggcaggcactccagcg
gccgagatcgctgttctgtatcggatcaatgctcagtcggaggtgcacgagcaggcactc
accaagctcggcattccgttccaggtgcgtggtggagagggcttcttcacccgcaccgag
gtccgtcaggcagtggcggcactgcgtcaggccgccggacgagacgacctccccgaaggc
gcagacaacggcgaagcgctggtttcactggttcgcgctgtactcgcgccactcggtctg
accaatgaagaaccttcgggcacgcaagcccgcgagcgctgggcgtcgctctcggctctc
gtggcgctgaccgaagaacagctcgtccacgaacccgaactgtcgctctccgggcttcta
caagagctcacagcccgagccgaggcgcggcacccaccgaccgtgcagggcgtgacgctg
gcttcgcttcacgcggccaaggggctcgaatgggatgcggtgttcctggtcggcctcaac
gacggcaccctgccgatccaacacgttctcggcgacgccaattcgggcgccgacgacgtc
gcggtggaggaggagcgtcggcttctgtacgtgggggttacccgcgcccgcgagcatctg
cagctgtcttgggcattggctcgcaatgagggtggacgcaagtcccgtcgccggtcgagg
ttcctcaacgggctcatccccgaggactcaccggcttcgcgcgttgccgcgccgtcgtcg
gggaacaagaagcgtccgcgctgccgcgtctgcggcaaaccgttgatcgggacgtcggcg
acaatgctcgggcgctgcgaaaaatgcccgtccaatgtcgacctggaattgctcgagcac
ctcaaggcctggcgtctggacaagtcccgagaactcaaagttccggcctatgtcgtcttc
agtgacaacacactgatggctattgccgaacaacgaccacaagacaatcgtggactggtt
tcgatccctggaatcgggccgaagaaactcgacaacttcggagaagacgtactagctgtc
attcgcggcgaactgcgtgcggcaacactcgatatctga
DBGET
integrated database retrieval system
