KEGG   Rhodococcus sp. H-CA8f: CPI83_19185
Entry
CPI83_19185       CDS       T10533                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
rhoh  Rhodococcus sp. H-CA8f
Pathway
rhoh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rhoh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CPI83_19185 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhoh03400]
    CPI83_19185 (xth)
Enzymes [BR:rhoh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     CPI83_19185 (xth)
DNA repair and recombination proteins [BR:rhoh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     CPI83_19185 (xth)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: ATI33934
LinkDB
Position
complement(4113679..4114524)
AA seq 281 aa
MLAVPQTADSHILAPHTITSVNVNGVRAAARKGMLDWLEKTSADFICLQETRASDDQLRE
TLEPALGNGWFLVSAEPSAKGRNGVAVLSRTEPDAVRIGHGDDEFLDAGRYIEADFADLT
VASLYLPSGEALTPKQEEKERFMASFAVHLASTAAAAEAADRHVVVSGDWNIAHTELDLK
NWKTNKKSSGFLPEERAWMDLLFAEDSAWVDVFRTLHPGVDGPYSWWSYRGKAFDNDSGW
RIDYQVATRGYAERAKVALVERAESYDLRWSDHAPVTVSYR
NT seq 846 nt   +upstreamnt  +downstreamnt
gtgcttgccgtgccacaaactgctgactcccacattcttgcgccccacaccatcacgtcc
gtgaacgtcaacggcgttcgagcagctgcccgcaagggcatgctcgattggctggagaag
acgtcggcggatttcatctgccttcaggaaacgcgtgcgtcggacgatcagcttcgcgag
actctcgaaccagcgctcggcaacggatggttcctcgtctccgccgagccgtccgcgaag
ggacgcaacggagtcgctgtgctttcacgcacggaacctgacgcggtgcggatcggtcac
ggcgacgacgagtttctcgacgccggtcgatacatcgaagccgacttcgcggatctgacc
gtcgcgagcctgtacctgccctccggtgaggcgctcacgccgaagcaggaggagaaggag
cggttcatggcgtccttcgcagttcacctcgcctccaccgctgcggcggccgaggctgcc
gatcgtcacgtggtggtcagcggcgattggaacatcgcgcacaccgaactcgacctcaag
aactggaagaccaacaagaagtcttcgggattcctccccgaggagcgcgcctggatggat
ctgctgttcgccgaagattccgcgtgggtcgatgtcttccgcaccctccatccgggtgtc
gacggtccgtactcgtggtggtcgtaccgcggcaaggcattcgacaacgattcgggttgg
cgtatcgactaccaggttgccacccgcggatacgccgagcgggccaaggttgcgctcgtg
gaacgcgctgagtcctacgacctccgttggtcggatcacgcacctgtcactgtctcgtac
cggtag

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