Rhodococcus sp. H-CA8f: CPI83_20080
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Entry
CPI83_20080 CDS
T10533
Name
(GenBank) Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rhoh Rhodococcus sp. H-CA8f
Brite
KEGG Orthology (KO) [BR:
rhoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhoh03000
]
CPI83_20080
Transcription factors [BR:
rhoh03000
]
Prokaryotic type
Helix-turn-helix
Other families
CPI83_20080
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GFIT
Motif
Pfam:
HTH_8
AAA_lid_14
HTH_30
HTH_23
HTH_28
MCM5_C
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ATI34090
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Position
complement(4348900..4350567)
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AA seq
555 aa
AA seq
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MSANPGEREPVRPEIALSWKRSRLSGLDPSSAIAVDTEEQDGESRLLRAAAPVLDEVSQQ
IAGTGFCVLLADRECRVVASVYSDSRVERTIERLGVVNGSRFGEEHAGTNALGTPLEVGR
SVVIHGDEHFLDSLKGLSCYGQPILHPVTRRVEGILDMTGVVSQANPLFAPFLARAAADI
EKRLLEGSKASEQRLVDAFQRVSHQRHIAVAAIGDDILLSNRTALDLLDTADHVSLRSLI
ADLNPDQSRLVTVELASGALARVQADRISGADGGALFLVEPLQRERAPIRRTHERAPSPG
ERLRRDLMRARASSSAVAISGEAGSGRTSAASDVVGSVDASWHDATRIAFDGREQWITDL
VRAARKRSGVVVIEQVQLLPDSVLPLVADLIDASAEGPKIVLTSGAAVDLPPTIAALLSR
CASRVVITPLRERQAEIAELAQVMLEGISPELRLTASAAEALAAASWPGNLAELRVVLNR
ASGERSSNRIDVVDLPEDYRTTAKVSRLAGREKAERQAIIGALKDCGGNKVHASAQLGIS
RSTLYTRMRALDITV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgaacccaggggagcgtgagccggtacgccccgagatcgcgctctcctggaag
cgttctcgactgagtggcctcgatccgtcgtcggcaatcgccgtggacaccgaggagcag
gacggcgaatctcgtctgctccgggcggccgcgcccgtgctcgacgaggtgtcgcaacag
atcgcgggcaccggtttctgtgtgctgcttgctgatcgagaatgccgcgtggtcgcttcg
gtgtactccgacagccgcgtcgagcggacaatcgagcggttgggcgtcgtcaacggttca
cgcttcggtgaagagcacgccggtaccaatgcactcggtactccgctcgaggtaggtcga
agtgtggtgatccacggggacgagcatttcctcgacagcctcaagggattgagctgctac
ggccagccgatcttgcatcccgtcacacgtcgcgtggagggtattctcgacatgaccggc
gttgtctcgcaggccaacccgctgttcgcgcccttccttgcgcgtgctgcagcggatatc
gagaaacgactgctcgaaggctccaaggcgtcggagcagcggctggtcgacgcattccag
cgagtgtcacatcagcgccacattgccgtcgcggccatcggcgacgacatcctgctgagc
aaccgaacggccttggatctgctcgacaccgccgaccacgtatcactccggtccttgatc
gccgatctcaatcctgatcaatcgaggctcgtgacagtcgaattggcgtccggtgcgctg
gcgcgagttcaagccgaccggatttccggggccgacggcggtgcactcttcctggtcgaa
ccactccaacgggaacgggcgcccatccgcagaacccacgagcgggcaccatctccgggg
gaacgactgcgccgagacctcatgcgagcgcgggcctcgtcgtccgcagttgccatctct
ggtgaagcgggttccggtcgaacttcggcagcatcggacgtggtcgggagcgtcgacgcc
agttggcacgatgccacgcggatcgcgttcgacggccgtgagcagtggatcaccgatctt
gtgcgagcagcccgtaagcgttcgggcgtggtcgtgatcgaacaggtgcagctccttccc
gattcggtgttgccgctggtcgcagacctgatcgatgccagcgccgaggggccgaagatc
gtactgaccagcggggcggcagttgatcttccgccgaccatcgcggcgctgctttcacga
tgcgcctccagggttgtcatcacccctctgcgcgagcgacaggctgagatcgccgagttg
gctcaggtgatgttggaggggatctcgcccgagttgaggttgaccgccagcgctgccgaa
gcgctcgctgcggccagttggccgggcaacctggccgaattgcgcgtcgtgttgaatcgg
gcctcaggtgaacgctcgagtaatcgcatcgacgtcgtcgatctgcccgaggactatcgc
accacggccaaggtgtcgcggttggcagggcgggagaaggccgagcgccaggcgatcatc
ggagcgttgaaagactgcggcggcaacaaggttcacgcgtcggcgcaactcggaatcagc
cgaagcactctctacacacggatgcgggcgctcgacatcactgtgtag
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