Rhodococcus sp. H-CA8f: CPI83_23080
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Entry
CPI83_23080 CDS
T10533
Name
(GenBank) hypothetical protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhoh Rhodococcus sp. H-CA8f
Pathway
rhoh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhoh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CPI83_23080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhoh02000
]
CPI83_23080
Transporters [BR:
rhoh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CPI83_23080
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Glyco_hydro_46
Motif
Other DBs
NCBI-ProteinID:
ATI34624
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Position
4954506..4956134
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AA seq
542 aa
AA seq
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MNGTQSMTTSRLSSTPIRVAILASTLAVAAGCSTAIPTASADSEPASGGDLTFAINTFPP
CIDKTLNGQTATAFHPLYDKLVDQNLDTGEIVPWLATSWEVQNDGRRFVFTLQDGVTFSN
GERLDAQVVADNFESQKRLGDSGFATTAKSHLATFIGAEVLDPSTVALDFSEPSAGFLQA
ARSDTLAIIAPESLKKTPEERCAQGVIASGPFVQKELETNAKVVLARRDGYHWGSSLNKN
KGEAYLDSITFLVVPESSVRIGGLTSGQLDAAIDIPSTDVDRAQSAGLTVIPSIAAGIND
SLLLNPTFAPVLADLNVRRALVKGIDTQQIIDTTYTPSDEKARSILSVKAPGYTDLSSEY
TYDPSGAKSLLDASGWTVGGDGFRTKDGEKLNVELAYRNHLPQSQFELIQSQLRDIGVTV
NLQPRSTAEDNAARTDGTWESIYFQSLRADGDVLLVFSPTLGSTKGIASTPELNALLVKQ
SQTVDIDARNEVLKEIQELIADQALAIPLHASSLIYATTPAVHDLRIQADLYSVDFVDAW
KS
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaactcagtccatgacgacgtcgcggctttcatccacaccgatccgagtcgcc
atcctggcgtcgacgcttgcagttgcggctggttgcagcactgcaataccaactgccagc
gcggactccgagcccgcgtccgggggcgatctgacctttgccatcaatacgtttccaccg
tgcatcgacaagaccctgaacggtcaaaccgctacggcgttccatcccctctacgacaaa
ctcgtcgaccagaatctcgacaccggggagatcgttccttggttggcgacgtcctgggag
gtccagaacgacggtcgacgattcgtcttcactctccaggacggagttaccttcagcaac
ggcgaacgtctggatgcacaggtcgtggcagataacttcgagagccagaaaagactggga
gacagcggtttcgcaaccactgcgaaatctcatctcgcgaccttcatcggggccgaggta
ctcgacccctcgaccgtcgcactcgatttctcggaaccatcggcaggattccttcaagcc
gcccgctccgacacgctcgccatcatcgcaccggaatccttgaagaagacgcccgaagaa
cgctgcgcccagggcgttatcgcttcaggtccattcgtacagaaagaactggagaccaac
gcgaaggtcgtactcgcccgtcgggacgggtaccactggggatcctcactcaacaagaac
aagggagaggcatatctggattcgatcacctttttggtggtccccgaatcctcggtgcga
atcggcggtttgacgtcaggacaactggacgccgcgatcgacattccgagcacagacgtc
gaccgcgcacaaagcgccggactcactgtcatcccgtccattgctgccggcatcaacgac
tcgctcttgctcaaccccacgttcgcgccggtacttgcggacctgaacgtgcggcgcgcc
ttggtgaagggtatcgatacccaacagatcatcgataccacctacacaccgagtgacgag
aaagcacgcagcatcctgtctgtgaaagcgcccggctacaccgatctctcgtccgagtac
acctatgatccgtcgggtgcgaagtcactgctggacgccagtggatggacagtcggcggt
gacggattccgaaccaaggatggtgagaaactgaacgtggaattggcctaccgcaaccac
ctcccacaatcgcagttcgaactgatccaatctcagctgcgcgacatcggagtcacggtg
aacttgcaacctcgctcgactgccgaggacaacgccgcgagaaccgacggcacgtgggaa
tcgatctacttccagagcttgcgcgccgacggtgacgtactgctggtgttcagtcccact
ctcggctcgaccaaaggcatcgcctcgactcccgagctgaatgcgttgctggtcaaacaa
tctcagaccgttgacatcgatgcgagaaacgaagtgttgaaggagattcaggagctgatt
gccgatcaggcactggcgatcccgttgcacgcctcttcgttgatctacgcgacgactccc
gcggttcacgacctgcgcatccaagccgatctctactcggtggacttcgtggatgcgtgg
aagagctag
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