Rhodococcus sp. H-CA8f: CPI83_24960
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Entry
CPI83_24960 CDS
T10533
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
rhoh Rhodococcus sp. H-CA8f
Pathway
rhoh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CPI83_24960 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoh03400
]
CPI83_24960 (recC)
Enzymes [BR:
rhoh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CPI83_24960 (recC)
DNA repair and recombination proteins [BR:
rhoh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CPI83_24960 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ATI34952
LinkDB
All DBs
Position
complement(5373294..5376575)
Genome browser
AA seq
1093 aa
AA seq
DB search
MLKLYRAERSDTLVSALATLLRTPLSDPFARETVAVPAKGVERWLNQRLSSQLGTSGPSA
VDGISANIAFPSPARLVAESVAAVSGITADDDPWSPTRLVWTVLDVIDESLGEPWCGVLA
KHLEGHREGRRFASATHVTELFRSYAAQRPQMLIDWAAGRLTDGHGLALSEDFEWQARLW
CIVADKIDVPGPAERLGQVSRALVEDPALVDLPERLSVFGPTRLPVDQRMILSALSANRD
VHIWLPHPSPALWTKMSSRIPPRSESTIRRSEDGSALISANPLLSSLARDVRELQISLGA
AEFESVHLPEPAGPKSLLATVKADVIADRAPSVAAEPDGTVQVHACHGPARQVEVLRECL
LRLFEDDPTLQPRDVLVMCPDVETYAPLVRAAFGQGVHGHPGHLLRVRLADRGLRQTNPV
LAVLGSLLELADGRATASEVLDLAATEPVRTRFSWGDDELERLREWTTEAGARWGIGSRQ
RATFGLDAFPQNTFNTAMDRILLGVSADESENAWLDLALPLDDVDGTDIDLSGRFAEFVD
RLAVSFRDLAGPHSPAEWLRVLMRALDLLTDTAPADSWQSAGAHRELVAAVEFGGETVLR
LADVRAMLSRSLAGRPTRANFRTGELTVCTMVPMRSVPHRVVVLIGLDDEVFPRTGGVDG
DDILSRDPVVGERDLRSEDRQLLLDAVMSAGEHLILLYTGADPVTGVVRPPAIPLSGLLD
VLSATVGPEAINGVLTRHPLQSFDNRNFAPNKPFSFDTAALAGARAAAGTPIELPTVLSA
KLLEVHPKEVNLADLVNFLVHPARGFLRQRLGVRVPELDDDIADSLATELDPLTTWALGD
RMLLSRLAGRSSADFRAAEWRRGTLPPYNLGASVLGNVEWVVDQLAGLALPHLEGDSEAV
DVDIDLGDGRRLTGTVTGVHGNSVVRASYSSLAPKHRMTAWINLLALKAHGRPGALDAVS
IGRGRGKIAAARSVLDAPGNAVEILQQLVNLRERGLQRPLPMWAATSAEYARRRFGGESV
DDATNGADTQWTGQYGEMIDPSNAYVFGEARTLAELAADPPSDDEFVWAEEPTRFGVLAR
RLWDPLLTNERAE
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaagttgtaccgggccgagcgttcggacaccttggtctcggcgttggccacgctc
ctccgtacaccgctgtcggatccattcgcccgggaaactgttgcggtgccggccaagggc
gtcgagcgttggctcaatcagcggctgtcctcccagctaggcacgtccggaccgtcagca
gtggacggaatttctgcgaacatcgcgtttccatcacccgcgcgcctggtcgcggagtcc
gtggccgcggtcagtggaatcacggctgacgacgacccatggtcgccgacgcgattggta
tggacggttctcgacgtgatcgacgagtccctcggcgagccctggtgcggagtcctggcg
aaacatctcgaaggccatcgtgaaggtcgacggtttgcctccgccacacatgtcaccgaa
ctcttccgcagttatgccgcgcaacgaccacagatgctgatcgactgggccgccgggcgg
ttgaccgacggacacggattggcgctgtcggaggatttcgaatggcaggcacgtctgtgg
tgcatcgtcgcggacaagatcgacgttccggggcccgcagagcgactggggcaagtgagc
cgcgcgctggtcgaggacccggccttggtcgacctaccggaacgtctgtcggtcttcggg
ccgacccggctgccggtcgatcagcgaatgatcttgagcgcactcagtgcgaatcgggac
gtgcacatctggctcccgcatcccagccccgcgctgtggaccaagatgagctcgcgcata
ccgcctcgaagtgagagcacgatccgacgttcggaagacgggtcggcgctgatatccgcc
aatccgttgctgtcgagtcttgctcgcgacgttcgtgaacttcagatcagcctcggtgcc
gccgagttcgagtcggtgcatcttcccgaaccagccggcccgaaatccctcctggcgacg
gtcaaggccgatgtcatcgcagatcgtgctcccagcgttgcagcggaaccggacgggaca
gttcaggtccacgcttgccacgggccggcacggcaggtcgaggtgctccgcgaatgcctg
ctccgattgttcgaggacgacccgacattgcagccgcgcgacgtactcgtgatgtgcccg
gacgtcgaaacgtacgcacctttggttcgtgctgcattcgggcaaggcgtccatggccac
ccggggcatctccttcgagtaaggctggcagaccgcggattacgtcagaccaatcctgtc
ctggccgttctcggctctctcctcgaattggccgacggccgggctacagccagtgaggtt
ctcgacctggccgcgaccgagcctgtccgcacacgtttttcgtggggcgacgacgagttg
gaaagactgcgggaatggacgacggaagcgggtgctcgctggggaatcggtagtcggcag
cgtgccacgttcggtctcgatgcatttccgcagaacaccttcaacaccgccatggaccga
atcttgttgggggtcagcgcggacgaatcggaaaatgcctggttggatctcgcgctgcca
ctcgatgacgtggacggcacagacatcgatctgagtggtcgtttcgcagagttcgtcgat
cgcctggcagtctcgtttcgcgatcttgccggcccacattcgccggccgaatggcttcgt
gtgctgatgcgggccctggatctgctgaccgacactgcgcccgcagattcctggcagagc
gcgggggcccaccgcgaactggtagctgctgtcgaattcggcggagagacggtgttacgt
ctggccgatgttcgcgcgatgctctcgcgcagcctcgcgggcagacctacgcgtgccaac
ttccgaaccggcgaactgacggtgtgcacgatggttccgatgcgttcggtgccgcatcgc
gtggtcgttctgatcgggctcgacgacgaagtgttccctcgaaccggtggagtcgacggc
gacgacatcttgtcccgtgatcccgttgtgggggagcgtgatctgcgcagtgaagaccgg
caactgcttctcgatgccgtgatgtctgcgggtgagcatctgattctgttgtataccggt
gccgatccggtcaccggcgtcgtcagaccaccggcgatccccctcagtggcctcctcgac
gtactcagtgcgacggtgggcccggaagcgatcaacggggtgctgactcgacacccgttg
cagtcgttcgacaatcgaaacttcgcgccgaacaagccgttcagcttcgacacggcagcg
ctggccggtgccagggctgctgccggaacaccgatcgaattgccgacagtcttgtcggcc
aagctactcgaggtgcatccgaaggaagtgaaccttgccgacctggtgaacttcctcgta
caccccgcccgtggttttctgcgccaacgcctcggcgtccgggtaccggaactcgacgac
gacatcgcggattcgctggcaaccgagctcgatccactgaccacctgggctctgggtgac
cggatgcttctctcgcgcttggctggacgcagctctgcggatttccgtgcagccgagtgg
cgccgcggtactttgccgccctacaacctgggcgcctcggttctgggcaacgtcgagtgg
gtggtagaccaacttgccggtcttgcattgccacacctcgagggcgactccgaggctgtc
gacgtcgacatcgacctcggtgacgggcgtcgtctcaccggaacggtaaccggtgtgcac
ggcaattcagtggtgcgggcatcgtattcctcactggcgcctaaacatcggatgacggcc
tggatcaacctgctcgccttgaaagcgcacggccgacccggtgcgctcgatgcagtctcc
atcggacggggtcggggaaagatagcagcggcacgatcggtgctcgatgcgccaggcaat
gcggtcgagatcctgcagcaactggtgaacctacgcgagcgggggctgcagcgtccgttg
ccgatgtgggccgctacttcagccgaatatgcgcgccgacgctttggtggcgagtcggtc
gacgatgcgacaaacggtgcggacacccagtggaccgggcagtacggcgagatgatcgat
ccaagcaacgcttacgttttcggagaagctcgaacactggcggagttggctgcggatccg
ccgtcggacgacgaattcgtctgggccgaggaaccgactcgattcggagttctcgcccga
cgactgtgggatccgttgctgaccaacgaaagagcggagtaa
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