Rhodopirellula sp. P2: PSR62_01800
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Entry
PSR62_01800 CDS
T10699
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rhoi Rhodopirellula sp. P2
Brite
KEGG Orthology (KO) [BR:
rhoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhoi03009
]
PSR62_01800 (rimO)
Enzymes [BR:
rhoi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PSR62_01800 (rimO)
Ribosome biogenesis [BR:
rhoi03009
]
Prokaryotic type
ribosomal protein modification factors
PSR62_01800 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Mur_ligase_C
DNA_alkylation
Motif
Other DBs
NCBI-ProteinID:
WDQ17302
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Position
508805..510235
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AA seq
476 aa
AA seq
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MQLPILPQNNVTVASPGTDPLIDPESGKPRGRYAVVSLGCPKNLVDTEQMLGRLDADGYR
MVDSVDGADFVVVNTCGFIDSARDESMAAIDEMLALKRDGKLRNVVVTGCLAERQQGKLL
EARPDIDALVGVFGRNDIVSVVDELYSGLQEQRTIFKPAAVNPLSDAMRSAVTPRHFAYL
KISEGCDRLCTFCAIPKMRGKHFSKPIEQIIDEAKRLGDSGVREIVVVAQDTTYYGMDRY
GEPRLNQLLQELDKIESVDWIRLMYFYPMYIDDALIDTLASAKRIVPYIDMPLQHASDKM
LKRMARKTTRSLQTDIVQKLRSRIDSLVMRTTMITGFPGETEEDFVELMDFVQESRFENL
GVFTYSIEEDTPAARLPNRVDPAVAARRRDDLMELQQQIAFDWNDSRVGGTEDVLIDAKM
PEQEGVFIGRTRSEAPDVDGLIYVSQVDPDSPVEVGQIRPCEIVASQGYDLVAAAT
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttcccatcctcccgcagaacaacgtgacggtcgcttcaccggggacagacccg
ctgatcgatcctgaatcgggaaaaccgcgggggcggtacgcggtcgtttcattgggctgt
cccaagaacctcgtcgacaccgaacaaatgctcggtcgcctcgacgccgacgggtaccgg
atggtcgattcggttgacggtgccgacttcgtcgtggtcaacacctgcgggttcatcgac
tcggcgcgtgacgaatccatggccgccatcgatgagatgctggcgctcaaacgggacggc
aaacttcgcaacgtcgtcgtcacgggatgcttggccgaacgacaacagggcaaactgctg
gaagctcgccccgacatcgacgccttggtcggcgtgttcgggcgcaacgacatcgtgtcg
gtcgttgacgaactctattcaggactgcaagaacaacgcacgatcttcaaacccgccgcg
gtcaacccactcagcgacgcgatgcgatcggctgtcacgccgcgacactttgcctacctt
aaaatcagcgaaggctgcgaccggctgtgcacgttctgcgcgatccccaagatgcgtggc
aaacacttcagcaaaccgatcgaacagatcatcgacgaagccaaacgcttgggtgacagc
ggcgttcgcgaaattgtggtcgtggctcaagacacgacctactacggcatggaccgctac
ggcgaacctcgcctgaaccagttgctacaagaactcgacaaaatcgaatcggtcgactgg
atccggttgatgtacttctacccgatgtacatcgacgacgcgctcattgacacgctggca
tcggccaagcgaattgtgccgtacatcgacatgccactgcagcatgccagcgacaagatg
ctgaaacgcatggctcgcaaaacaacgcggtccttgcaaaccgatatcgttcaaaagctt
cgctcgcgaatcgattcgctggtgatgcgaaccacgatgatcacgggattccccggcgag
accgaagaggacttcgtcgagctgatggacttcgtccaagaatctcgatttgaaaacctg
ggcgtgttcacttacagcatcgaagaagacacaccggccgcaagattgcccaatcgagtg
gatcccgccgtggccgcgcgacgtcgtgatgacttgatggaactgcaacaacagatcgcg
tttgattggaacgattctcgcgtcggtggaaccgaagacgttctgatcgatgccaagatg
cccgaacaagaaggcgtgttcatcggccgcacacggagcgaggcgcccgatgtcgacgga
ctgatttacgtttcgcaagtcgacccggattcgcccgtggaagtcggacaaattcgcccc
tgcgaaatcgttgcgtcccaaggctacgacttagtggccgcagcgacttaa
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