Rhodopirellula sp. P2: PSR62_02650
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Entry
PSR62_02650 CDS
T10699
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rhoi Rhodopirellula sp. P2
Pathway
rhoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSR62_02650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhoi03019
]
PSR62_02650
03400 DNA repair and recombination proteins [BR:
rhoi03400
]
PSR62_02650
Enzymes [BR:
rhoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSR62_02650
Messenger RNA biogenesis [BR:
rhoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PSR62_02650
DNA repair and recombination proteins [BR:
rhoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PSR62_02650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RQC
RecQ_Zn_bind
HRDC
HTH_40
Peripla_BP_4
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-ProteinID:
WDQ17462
LinkDB
All DBs
Position
complement(749611..752529)
Genome browser
AA seq
972 aa
AA seq
DB search
MSSLASKSNPSIDPESLLPRFGLSQFRAGQRDVVDALAAGADCLCVMPTGGGKSLCYQLP
SLAREGTTIVVSPLIALMKDQVDTLQRRGIQARLLNSTQSPGQQESVMDEMAAGKLDLIY
VAPERLRNGRFLDVVPKANVSLLAVDEAHCVSEWGHDFRPDYSRLGRFRDRYLGGVQTIG
LTATATPTVRDDICELLNLKQPRVFVTGFARTNLRFTVTPCNNDVAKQNALRDYLSKHSG
AGIIYGATRKRCEEIAEWLPEKTGRKVGVYHAGMHPEERRRVQEAFMKGDLSAIVATNAF
GMGIDKSDIRFVVHYNMPGSLEAYYQEAGRAGRDGAMSQCLLLFAYADRQIQEFFIENRY
PSRETVKKVYEYLLSREEDPIELTLDQVREAIAVRDGSEAIGTSETLLSKAGALRRLDAS
SNQAVLRIDSDVPTLLDFLPREAKLKRQVMTAIEKIVGPRRGEDVFVRLSYLATRAGVER
VQLTRTLRELTKLKTFDYIPPFRGRAVHIMRRDVPFNQLKIDFEELARRKQAEYEKLDSV
IQFARSTSCRQHVILKYFGDPNAENCGKCDHCDPAGECMPKVDPSALAAANLSTAKALGE
SGSIGALSEQSGIDMVALTTAIRVILSGVTRTHGRLGKNLIAQMLAGSKNKKVTQLRLSR
LSTYGMLTGLKQGELTDAMDSLLTVGLLDQKELNERRPTVHMTDLGRQVMNGQVPLPSSL
QLKYPLAKKLAKVASKIESGDVAEEEPGDIEPSVATQPASSVTQTPPSAETPKPDISVVA
AEPLSSNDAQDLLDQDLSDRIKRFRRKRSAALNVAPHRILSESTIKRLIQSKPANATQLE
GVQGISSEFIEAYGSDLLELIANTLAEHEIDCPPGTVASPPSEPVEASASEPKPSPDSER
LDETVADPSAWRHEYWTWRLCRDGYTLQQVAEIRGEDTSALVEHLIAAARAGQKIDPAWA
DTPANAKRLRNL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctctcgcatccaaatccaatccgtccatcgaccccgaatcgctgttgccgcga
tttgggttgagccagtttcgagccggccaacgggacgtggtcgatgctctggccgcgggc
gcggattgtctgtgtgtgatgccaactggcggcgggaaaagcctgtgttatcagctgcca
tcgttggcccgagaggggaccacgatcgttgtgtcgccgctgatcgctttgatgaaggac
caagtcgacacgctgcagcggcgaggcatccaggcgagattgctcaacagcacgcaatca
cccgggcaacaagagtcggtcatggacgaaatggccgccgggaagttggacctgatctac
gtggctcctgagcgtttgcggaacggtcggtttctggatgtggtccccaaggccaacgtg
agtttgttggcggtcgatgaagcccactgtgtgagtgagtggggccatgactttcgtccc
gattattcacggctgggacgattccgggatcgctacttgggcggcgtgcagacgatcgga
ttgaccgcaacggcaacgccgacggttcgcgatgacatctgcgagttgttgaacctgaag
caacctcgtgtgttcgtgaccggtttcgcgagaacgaacctgcgattcacggtcacgcct
tgcaacaacgatgtcgccaaacaaaacgcactgcgtgattacctttcgaagcactcggga
gcgggcatcatctatggcgcgactcgcaagcgttgtgaagagatcgctgagtggttgcct
gagaaaaccggacgcaaagttggcgtctatcacgccggcatgcatcctgaagaacgacgc
cgcgtgcaagaggcgttcatgaaaggcgacttgtccgcgattgtggcgaccaacgcgttt
gggatgggcattgataaatcggacatccggtttgtggtgcactacaacatgccgggttcg
ttggaggcttactatcaagaagcggggcgtgccgggcgtgacggggcgatgagccagtgc
ctgctgctgtttgcttacgccgatcgtcagatccaagagttcttcatcgagaaccgctac
ccctcgcgagaaacggtgaagaaggtttacgagtacctgctttctcgagaagaagacccg
attgagctgaccctggatcaggtgcgggaggcaattgctgttcgtgacggcagcgaagcg
attggcacttccgaaacgttgttgtccaaagcgggggctcttcggcggttggatgccagt
tccaatcaagcggtgctgcggatcgatagcgatgtgccaacgctgctggatttcttgcct
cgcgaagccaagctgaagcgtcaggtcatgaccgcgatcgagaagatcgtgggacctcgg
cgcggcgaagatgtgtttgtccggttgagttacctggcaacccgagcgggtgtggagcgg
gttcagttgacacgcacgttgcgcgaactgaccaagctgaagacgttcgactacatcccg
ccctttcgcggtcgtgccgttcatatcatgcgacgggatgttcccttcaatcagctgaag
attgacttcgaagagctggcccgacgcaagcaagctgaatatgaaaaactggattccgtg
atccagttcgcgcgttcaacgtcctgtcgccagcatgtcattctgaaatactttggggat
cccaacgcagagaattgtgggaagtgcgaccactgtgacccggcgggcgaatgcatgccc
aaggtggatccttccgccttggcggccgcaaatttgtcgaccgcgaaggcactgggggaa
agcggctcgatcggtgcgttgagcgagcagtccgggatcgacatggtcgccctgacgacc
gcgattcgggtgatcctgagcggagtcacgcgaacgcacgggcgattgggaaagaacctg
attgcgcagatgttggctggatcaaagaacaaaaaggtcacgcaattgcgactgagccgg
ctgagcacctacggcatgctgacggggctgaagcaaggcgaattgaccgacgcgatggac
tcgttgttgacggtcggattgctggatcagaaagaactcaatgagcgccgcccaaccgtt
cacatgaccgacctggggcggcaagtgatgaatggtcaggttccgttgccgtcgtcgttg
cagttgaagtacccgctcgcgaagaagttggccaaggtggctagcaaaattgaatctggt
gacgttgccgaggaagaacccggcgatatcgagccatccgttgcaactcagcctgcttct
tcggtgacgcagacaccgccctcggcagagactcccaagcccgacatcagcgttgtggcc
gcggaaccattgagctcgaatgacgcacaggatttgcttgatcaagacctctcggatcgg
atcaagcggtttcgacgcaagcggtcagcggcactgaatgtggcgccacaccggattctt
tccgaatcgacgatcaaacgattgatccagtccaaacctgccaacgcgactcagttggaa
ggcgtgcaggggatttccagcgagttcatcgaggcatacggcagcgatttgctcgagttg
attgcgaacacgttggcggaacacgagatcgactgcccgccgggaaccgttgcttcgcca
ccgagcgagccggtcgaggcttctgcgagcgaaccaaagccaagtccggattcggagcgg
ctggatgaaaccgtggctgatccatccgcgtggcggcatgaatactggacctggcgattg
tgccgcgatggatacacgttgcagcaagtcgcggaaattcgaggcgaggacaccagtgcg
ttggtcgagcacttgatcgccgccgctcgagccgggcaaaaaattgatcctgcttgggcg
gacacgccagcgaacgccaaacgcctgcggaatctgtag
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