Rhodopirellula sp. P2: PSR62_05740
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Entry
PSR62_05740 CDS
T10699
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhoi Rhodopirellula sp. P2
Pathway
rhoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSR62_05740 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhoi03019
]
PSR62_05740 (groL)
03110 Chaperones and folding catalysts [BR:
rhoi03110
]
PSR62_05740 (groL)
03029 Mitochondrial biogenesis [BR:
rhoi03029
]
PSR62_05740 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhoi04147
]
PSR62_05740 (groL)
Enzymes [BR:
rhoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PSR62_05740 (groL)
Messenger RNA biogenesis [BR:
rhoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PSR62_05740 (groL)
Chaperones and folding catalysts [BR:
rhoi03110
]
Heat shock proteins
HSP60 / Chaperonin
PSR62_05740 (groL)
Mitochondrial biogenesis [BR:
rhoi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PSR62_05740 (groL)
Exosome [BR:
rhoi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PSR62_05740 (groL)
Exosomal proteins of other body fluids (saliva and urine)
PSR62_05740 (groL)
Exosomal proteins of breast cancer cells
PSR62_05740 (groL)
Exosomal proteins of colorectal cancer cells
PSR62_05740 (groL)
Exosomal proteins of bladder cancer cells
PSR62_05740 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WDQ18055
LinkDB
All DBs
Position
complement(1658542..1660164)
Genome browser
AA seq
540 aa
AA seq
DB search
MAKQLLFDDHARARMLAGVEKLAKAVATTMGPTGRNVIIDKSFGGPTVTKDGVTVAKEIE
LEDRFENMGAKLVIEVAQKTSDLAGDGTTTATVLARAIFKEGLRNIVAGSNPTAIRRGIE
KAVEAACDQLVEMGRPVNGKQEVAHVGAISANNDNVIGELLADALERVGKDGVITVEEGK
SRNTEVEYVDGMQFDKGYVSPYFINDSSTMEASLEDALVLLYEKKVSNIRDLVPLLEKTA
QTGQPLLIIAEDVDAEALTLLVVNKLRGTLNVCAVKAPGFGDRRKSMLGDIATLTGGTLI
SEDLGMQLENVTLEHLGRAKKVTVDKSNTTIVEGAGKREDIDKRVAQIRAQIEQTDSDYD
KEKFQERLAKLAGGVAVISVGAETEAEMKQTKARLEDALHATRAAVEEGILPGGGVALVH
CREALEAAKKKAKGDEKIGVEIVLRALDAPMRQIADNGGIDGSVVVDEVLQKNNPKIGFN
AHTGEYTDMVKAGVIDPVKVVRTALTNAASIAGLLLTTEALVTNFEQEDKDKRPVEGMIS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaacaattgctttttgacgatcacgctcgggcccgcatgttggccggcgttgaa
aaactggccaaggccgtcgcaacgacgatgggccccaccggtcggaatgtgatcatcgac
aaatcctttggcggtcccaccgtgaccaaagacggcgtgaccgttgccaaagaaatcgaa
ctcgaagatcgcttcgagaacatgggtgcgaaactcgtcatcgaagtcgctcaaaagacc
agcgacttggccggcgacggaaccaccaccgcaaccgtgctcgctcgtgccatcttcaaa
gaaggcctgcgaaacatcgttgccggtagcaacccaaccgcgattcgtcgcgggatcgaa
aaggctgtcgaagccgcttgcgatcaattggttgaaatgggacgcccagtcaacgggaaa
caagaagtcgctcacgtcggtgcgatctctgccaacaacgacaacgtgatcggcgaattg
ctcgcggacgcgttggaacgagtcggcaaagacggcgtcatcaccgtggaagaaggcaag
agccgcaacaccgaagtcgaatacgtcgacggaatgcagttcgacaaaggctacgtctcg
ccttacttcatcaacgattccagcaccatggaagcgagtctcgaagacgcgttggtgttg
ttgtacgaaaagaaagtcagcaacatccgcgacctcgtgccgttgctcgagaagaccgct
caaaccggtcagcccctgttgatcatcgcagaagacgtcgatgcggaagcattgacgttg
ctggtggtcaacaaactccgtggcacgctgaacgtgtgtgcggtcaaggctcctggcttc
ggcgaccgtcgcaaatccatgctgggtgacatcgcaacgttgaccggcggaacgctgatc
agcgaagacctcggcatgcagctcgagaacgtcaccttggaacacctcggtcgcgcgaag
aaagtcaccgtcgacaagtcgaacacgaccatcgtcgaaggtgccggcaaacgcgaagac
atcgacaaacgtgtcgctcaaatccgcgctcaaatcgagcaaacggacagcgattacgac
aaggaaaagttccaagagcgtttggccaaactggccggcggtgtggctgtcatcagcgtc
ggtgccgaaaccgaagctgaaatgaagcaaaccaaggctcgcttggaagacgctttgcac
gcaacccgcgctgcagtcgaagaaggcatcctgcctggtggcggtgtggctttggttcac
tgccgcgaagcgttggaagctgccaagaagaaggccaaaggcgacgagaaaatcggagtc
gagattgtcctgcgagccctggatgctcccatgcgtcaaatcgccgacaacggtggcatc
gacggcagcgttgtggtcgacgaagtcttgcaaaagaacaaccccaagatcggtttcaac
gctcacacgggcgaatacaccgacatggtcaaagccggcgtcatcgacccggtcaaagtg
gttcgcaccgccttgaccaatgccgccagcattgcaggcttgttgctcacgaccgaagcc
ttggtcacgaacttcgagcaagaagacaaagacaaacgtcctgtcgaaggcatgattagc
taa
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