Rhodopirellula sp. P2: PSR62_06290
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Entry
PSR62_06290 CDS
T10699
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rhoi Rhodopirellula sp. P2
Pathway
rhoi03410
Base excision repair
rhoi03430
Mismatch repair
rhoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSR62_06290 (recJ)
03430 Mismatch repair
PSR62_06290 (recJ)
03440 Homologous recombination
PSR62_06290 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoi03400
]
PSR62_06290 (recJ)
DNA repair and recombination proteins [BR:
rhoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PSR62_06290 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PSR62_06290 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PSR62_06290 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WDQ18160
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Position
complement(1808597..1810396)
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AA seq
599 aa
AA seq
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MSTDSSSISDSNQLVDSGTKREWRITPHDAPLVEQLIRTTGLPPVVAQLLVSRGVYSQED
AATFLDTKLTSLRDPQLLPGVPAATEKILAAAEAKTPIVIYGDYDADGMTGSAILVNCLR
LLGAEVSYHVPNRLEEGYGLNEDSIRKLAARGKQMIVSVDCGIASLQCAKLCRKLGVTLI
ITDHHQIGDELPDADIIVHPRLPGTAYPFGELCGAGVAFKLAWSLCQAKCGQKKVTPPMK
RFLMQSLSLAAIGTIADVVPLLDENRVLVNHGLRVMQTEPLPGLWELMKLTKLDQASELT
TENISFGLAPRLNAAGRLGQAQLGIELLTIEAGDRAVALAQYIDQLNGTRDTLQRSVQLA
AQKQANTDFDPEKDPALVLAGVGWHTGVIGVVAGRLAEKYAKPVIILSLDTAGKVDATGS
GRVGGTGINLYEALRECDDRLVRYGGHPAAGGLTIRESDIEAFRGDFCEAVSKQWSEQDL
APAIQIDAEAPLGQLNLQTMKQIETMAPFGAGNPRPVLMGRDIQLSEPAKKMGKGENHLS
VRLKQGERVIRGVAFGAADWCEPLNQHNGPIEIAYRPVINEFNGYRSVEVHLVDWRKQT
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaccgattccagctcgatttccgattccaaccagcttgttgattccgggacgaag
cgggaatggcggatcactccgcacgatgctccgttggtcgaacaactgattcgcaccacg
ggactgcctccggtcgtcgctcagttgctcgtcagtcgcggcgtttattcgcaagaagac
gccgccacgttcttggacaccaaactgaccagcctgcgtgacccgcagctgctgcccggc
gtccctgccgccacggaaaaaatcctggcggccgcagaagccaaaacgccgatcgtcatc
tacggcgattacgacgccgacggcatgaccggatccgcgatcctggtcaattgcctgcga
ttgctcggggccgaggtcagctaccacgtgcccaaccggctcgaggaaggttacggcctg
aacgaggactcgatccgcaaactggccgctcgcggcaagcaaatgatcgtttcggtcgat
tgcgggatcgccagcctgcagtgcgccaaactctgtcgcaagctcggcgtcacgctgatc
atcaccgatcaccaccaaatcggcgacgaactgcccgacgccgacatcatcgtccacccg
cgactgcccggaacggcttacccgtttggcgaactttgcggcgccggcgtggccttcaaa
ctcgcctggtcgctatgccaagccaaatgcgggcagaaaaaagtcacaccgccgatgaag
cgattcctgatgcaatcgctgtcgctggccgccatcggaacgatcgccgacgtggtcccg
ctgctcgacgaaaatcgcgtgctggtcaatcacggcctgcgagtcatgcagactgaaccg
ctgccgggtttgtgggaactgatgaagctgaccaaactggatcaggccagcgaattgacg
accgaaaacatctccttcggcctggccccccgcctcaacgccgccggacgactcggccaa
gcccaactgggaatcgagctgctgacgatcgaagctggcgaccgcgccgtcgcactggcc
cagtacatcgaccagctcaacggaacccgagacacgctgcagcgaagcgtgcaactggcc
gcgcagaaacaagcgaacaccgactttgaccccgaaaaggaccccgccttggtcctggcc
ggagtcggctggcacaccggagtcattggagtcgtcgcgggtcgcttggcagagaaatac
gccaaacccgtgatcattctctcgctcgacaccgcgggcaaagtcgacgcgaccgggtcg
ggacgcgtcggcggcaccggcatcaatctctacgaagccctgcgtgaatgcgacgaccga
ctggttcgctacggcggtcacccagccgccggcgggctgacgattcgcgaatccgacatc
gaagcgttccgcggcgacttctgcgaagccgtttcgaaacagtggtccgagcaagacctg
gcaccggcgatccagatcgatgcggaggctccgctcgggcaactgaacctgcaaacgatg
aagcagatcgaaaccatggctccctttggagctgggaacccacgccccgttttgatgggc
cgcgacattcagctcagcgaacccgccaaaaagatgggcaaaggtgaaaaccacctgtcc
gtgcgtctgaaacagggcgaacgcgtgattcgcggggtcgccttcggtgccgcggactgg
tgcgaaccgctgaaccagcacaacggcccgatcgagatcgcttaccggcccgtcatcaac
gagttcaacggctatcgcagtgtcgaagtccacctggtggactggcgaaaacaaacctga
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