Rhodopirellula sp. P2: PSR62_10000
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Entry
PSR62_10000 CDS
T10699
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
rhoi Rhodopirellula sp. P2
Pathway
rhoi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rhoi00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PSR62_10000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhoi03021
]
PSR62_10000
Transcription machinery [BR:
rhoi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSR62_10000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
HTH_23
Sigma70_r4_2
HTH_36
MarR_2
MerR_1
HTH_17
HTH_Tnp_ISL3
HTH_7
KORA
Rv2175c_wHTH
DUF4777
Motif
Other DBs
NCBI-ProteinID:
WDQ18856
LinkDB
All DBs
Position
complement(2820209..2821882)
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AA seq
557 aa
AA seq
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MHASYRNIAVKELRDQLSRFSPRAKKVEQSLLAEKLLSEIQPDRDYSMDYVTFRITNYRP
ESSLRQTIASADLVHDLRLLIEDLSDSADISADEAGEHVHTVADLSRNFHVSTKTISRWR
DAGLVSRKFLFGKRKRVGFLNSSVDRFIANNRDKVRRGERFSQLSDNEKTEMVERARQLV
EGGATFAEVIQQIASIMHRSPETVRYTLKNFDAKNRQLAIFPHHRETLSEEDKRVIHQLQ
LHGATIPQLCKRFKRTRTSIQRILNEVRMQHLLEMPLEYIYNEDFEDTSREPEYLAEMPV
SESARKVRAPSELPSYLAALYDVPLLNREQEGHLFRKMNYLKHRANKLRQSLIEADRMDT
AVMDQIQSLYEEAVKVKNKIVQSNLRLVVSIAKRHVASAEDFFSLISDGNMSLIRAVEKF
DYSRGNKFSTYASWAIMKNFARTIPNEFKHRDRFRATPEEMFVAHQDERLDPYLEETVQL
QRQRELARILDRLDEREQKIITARFGLQRGVEPLTLKEVGEEMGVTKERVRQLEARALSK
LRDAARDAKIDVELGAS
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcgtcttaccgaaacattgctgtcaaagaacttcgcgatcaactgtctcgattc
agccctcgagccaagaaggtcgagcagtccttgttggccgagaaattgctgtcggaaatt
cagcccgatcgcgattactccatggactacgtcaccttccggatcaccaactaccgcccc
gaatcgtcgctgcggcaaacgatcgcctcggccgacttggtgcacgacctgcgtttgctg
atcgaagacctctccgattcagccgacatcagtgccgacgaagccggtgagcacgtgcac
accgtcgccgacctcagtcgcaatttccacgtttccaccaagacgatcagccgctggcgt
gacgccggcttggtcagccgaaagttcctgttcggcaaacgcaaacgagtcggattcctg
aacagcagcgtcgatcgtttcatcgccaacaaccgcgacaaagtccgtcgcggcgaacgc
ttcagccaattgagcgacaacgagaagaccgagatggtcgaacgcgctcggcaattggtc
gagggcggagccacctttgccgaagtcatccagcaaatcgcatcgatcatgcaccgttcc
cccgaaacggttcgctacacgctcaagaacttcgatgcgaaaaatcgccaactggcgatc
ttccctcaccatcgcgaaacactcagcgaagaagacaaacgcgtcattcaccaactgcaa
ttgcacggcgccacaatcccgcaattgtgcaaacgcttcaaacgcactcgcaccagcatc
cagcgcattctgaatgaagttcgaatgcagcatctgctcgagatgcctttggaatacatc
tacaacgaagacttcgaagacacctcgcgagaacccgagtacttggccgaaatgcccgtt
tcggaatccgctcggaaagtgcgggctccctcggaattgcccagctacctggcggctctc
tacgacgtccccttgttgaatcgggaacaagagggccacctgttccgcaaaatgaactac
ctgaagcaccgtgcgaacaaactgcgtcaatcactgattgaagcggatcgcatggacact
gccgtgatggatcaaatccaatcgctgtacgaagaagctgtcaaagtgaagaacaagatc
gtgcaatcgaacttgcgtttggtcgtttccatcgccaaacgccacgtcgcctcggcggaa
gacttcttctcgttgatcagcgacggcaacatgtccttgatccgagccgtcgagaaattt
gattactcacgtgggaacaaattcagcacctacgcttcctgggcaatcatgaagaacttc
gctcggaccatcccgaacgaattcaaacaccgtgatcgcttccgcgccacgccagaagaa
atgttcgtcgcacaccaagacgaacgcctggatccctacctggaagaaaccgttcagctg
caacgtcaacgtgagttggctcgtatcttggaccgcttggatgaacgcgaacaaaagatc
atcaccgctcgctttggactgcaacgcggcgtcgaacctttgaccttgaaagaggtcggc
gaagaaatgggcgtcaccaaggaacgcgtgcgtcaactcgaagcacgggcactgagcaaa
cttcgcgacgccgctcgcgacgccaaaatcgatgtcgaactgggtgccagctga
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