Rhodopirellula sp. P2: PSR62_10650
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Entry
PSR62_10650 CDS
T10699
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rhoi Rhodopirellula sp. P2
Pathway
rhoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSR62_10650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhoi03019
]
PSR62_10650
03400 DNA repair and recombination proteins [BR:
rhoi03400
]
PSR62_10650
Enzymes [BR:
rhoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSR62_10650
Messenger RNA biogenesis [BR:
rhoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PSR62_10650
DNA repair and recombination proteins [BR:
rhoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PSR62_10650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
WDQ18974
LinkDB
All DBs
Position
complement(3018393..3019886)
Genome browser
AA seq
497 aa
AA seq
DB search
MGGPANANLKSDKRSLEQAQPILRDVFGHDAFRPSQSAVIQHVLAGEHAMVIMPTGRGKS
LCFQIPALLGSGDDLTLVLSPLIALMQDQVDGLVAKGIDATLINSSLDRMEREKRQEKLR
QNHYRLLYVTPERFRKPEFLDAISGRKIQLLAIDEAHCVSQWGHDFRPDYSRIADIRKQL
GSPTTIALTATATAECRADIVHQIGLKDGDMRLFHEGIDRPNLRIDVETVMGDDEKLDQI
LEALSEPLLQSPTSPASGGTILYFSLIKTLTRFSDLLLARSIDHVCYHGDQSRRDRRRIQ
NQFMSGERDLVLATPAFGMGVDKEDIRLVIHVETPGSMESYYQEIGRAGRDDQPSRCLWL
YDQDDLMTQMQFIEWANPDADFYDRLMFSLENHADRCIAYGLDWLRNELQRVSPHDHRVD
TALAMLDRHGVVAGPREPECFQLIGTLPEQFRNNQWLSEKRQRDQKRLYAMVQFAATPSA
ERQAFLNRYFLEDAPVQ
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtcccgccaacgcgaatttgaaatcagacaagcgttcgcttgagcaagcccaa
cccatcctccgggatgtcttcggccacgacgcgtttcgtcccagtcagtcggccgtcatt
caacacgttctcgccggagagcacgccatggtgatcatgcccacggggcgtggcaagtca
ctgtgctttcaaatccccgccttgctcggatcaggcgacgacctgacgctggtgctttca
ccgctcattgcactgatgcaagatcaagtggatgggctggtcgcgaaaggaatcgatgcc
actctcatcaattcctcgctggatcggatggagcgagaaaagcgacaggagaaactgcgt
cagaaccactaccggttgctctacgtcacgccagaacgcttccgaaagcctgaatttctc
gacgccatctccggacgaaagattcagctgcttgcgatcgacgaagctcactgcgtcagc
caatgggggcacgatttccgaccggattacagccgaatcgccgacatccgaaaacaactt
ggatccccgacgaccatcgccctgaccgcaaccgccacggcagaatgtcgcgccgacatc
gtccatcagatcggactcaaagatggcgacatgcgactgttccacgaaggaatcgatcgc
ccgaacttgcgaatcgatgtcgaaacggtcatgggcgacgacgaaaaactcgaccagatc
ctggaagctctctctgaaccactgcttcaatcgccaacctccccggccagcggtggaacg
atcctctacttctcgttgatcaagacgttgactcggttcagcgacctgctcctggcacgc
tccattgatcatgtctgctatcacggcgaccaatcacgcagggatcgacgtcggatccaa
aaccaattcatgtcgggcgaacgagatctcgtcctggccacgcctgcgtttggaatggga
gtcgacaaggaagacattcggctggtcatccacgtcgaaaccccaggttccatggagtcc
tattaccaagagattggtcgggcaggacgcgacgatcagccgagccgttgcctttggctc
tacgatcaagatgacctgatgacacaaatgcagttcatcgagtgggccaatccggatgcc
gatttctacgatcgcttgatgttctcactcgaaaatcacgcggatcgttgcatcgcgtat
ggcttggactggctgcgaaacgaactgcaacgagtcagcccgcatgaccaccgggtcgac
acagccctcgccatgctcgaccgacatggcgtggtcgctggcccaagggaaccagaatgc
tttcaattgatcggcacgttgcccgaacaattccgaaacaaccagtggctctcagagaaa
cgacaacgcgatcaaaaacggctgtatgccatggttcagtttgctgcgacgccgagtgct
gaacgccaagctttcttgaatcgctacttcttagaagacgcgcccgtccaatga
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