Rhodopirellula sp. P2: PSR62_11835
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Entry
PSR62_11835 CDS
T10699
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rhoi Rhodopirellula sp. P2
Pathway
rhoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSR62_11835 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhoi03019
]
PSR62_11835 (recQ)
03400 DNA repair and recombination proteins [BR:
rhoi03400
]
PSR62_11835 (recQ)
Enzymes [BR:
rhoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSR62_11835 (recQ)
Messenger RNA biogenesis [BR:
rhoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PSR62_11835 (recQ)
DNA repair and recombination proteins [BR:
rhoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PSR62_11835 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
HTH_40
RecQ_Zn_bind
HTH_23
ResIII
Sigma70_r4_2
HTH_38
HTH_28
HTH_29
Motif
Other DBs
NCBI-ProteinID:
WDQ19194
LinkDB
All DBs
Position
complement(3348729..3350966)
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AA seq
745 aa
AA seq
DB search
MSSPSKSTSTLSQSPPSNPEMDQAHSVLRSVWGYDSFRPLQADAVQDVVQGRDSLVVLPT
GGGKSLCYQVPALVRDGMSVVVSPLISLMKDQVDALTANGVSAALVNSTQSMDQKRETAD
RIRRGEIKILYLAPERLLTPKTLAFLRSLPISFFAIDEAHCVSNWGHDFRPEYRGLRILK
EQFPSASVHAFTATASQQVRDDITEQLQLHEPRVLVGNFDRPNLTYRMLRSDGKLNQIQQ
CIQQHRGESGVVYCITRKEVEQTAAALESMGVRTLPYHAGLAAEVRQANQEAFIQEKVDV
IVATVAFGMGIDKSNVRFVIHAGMPKSIEHYQQESGRAGRDGLAAECVLIHSGGDLMSWK
RILENGDRNNFQSAMGSVEAMASLCNGVQCRHASLVEYFGQEYDADNCDACDVCLGELDL
VDDPITLAQKILSCVVRLKERYGVAHTVKVLTGSKDQKVIQAGHDQLSTYNLLSNEGANA
VRTWIEQLISQNHLIRTGEYQSLRLTESGRALLKREGDVTLTKVSQKSSSRQPAANASWE
GVDRQLFDHLRALRSEMASERGVPAYVIFGDAVLRELARVRPTSIDKLTPIRGIGDRKRE
EFGQLFLDSIDQYCEKNPLARDQSDNTAPAPINQPRANTAPNAAMVQAFQLFRDGRSASE
VAEKMGRAESTVSKYLSDFIQSENITDPTQWVPKEEAEAIRAALLAAEDERLRPVFEALN
EEMSYEKIRIVATCMKNEMADDADD
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgccctctaaatcgacctcaaccctctcccaatcacccccgtccaatcccgaa
atggaccaagcccattcggtccttcggtcggtgtggggatacgattccttccggcccctg
caagccgatgcggtgcaggatgtcgtccagggacgcgacagcttggtcgtcctgccgacc
ggcggcggtaaatcgctgtgctaccaagtccctgcgctggtgcgagacggcatgtccgtg
gtggtctcgccgctgatttcgttgatgaaggaccaagtcgacgcgttgaccgccaacggc
gtctcggcggccctggtcaacagcacgcagtcgatggatcaaaaacgcgaaaccgcggac
cggatccgtcgcggcgaaatcaagatcctgtacttggccccggagcgtttgctcacgccc
aaaacgctggcctttcttcgcagcctgccaatctcttttttcgcaatcgatgaggcccac
tgcgtcagcaattgggggcatgactttcgccccgaatatcgcggcttgcgaatcctcaaa
gaacagttcccttccgcatcggtgcacgccttcaccgccaccgcctcccaacaagttcgt
gatgacatcaccgaacaattgcagctccacgaaccgcgagtcttggtggggaacttcgac
cgccccaacctgacgtaccggatgctacgcagcgatggcaaactgaatcagatccagcaa
tgcatccagcaacatcgcggtgaatcgggcgtcgtctactgcatcactcgaaaagaagtc
gaacaaaccgccgccgccttggaatccatgggcgtccgcacactgccgtaccatgcggga
ctggctgcggaggttcggcaggcaaaccaagaagcgttcatccaagaaaaggtcgatgtg
atcgtcgcgacggtggcctttggaatgggaatcgacaaatccaacgtgcggtttgtcatc
cacgccgggatgcccaaatcaattgaacactaccagcaagaaagcggtcgcgccggccgc
gatgggctcgccgctgaatgtgttctgattcacagcggtggcgatttgatgtcctggaaa
cgcatcctcgaaaacggcgaccgcaacaactttcaatccgccatgggttccgtcgaggcg
atggcttcgctgtgcaacggagtgcaatgcagacacgcctcgctggtggagtactttggc
caagaatacgatgccgacaactgcgatgcctgcgacgtctgtctcggtgaactcgacctc
gttgacgatccgatcacactggcacaaaagatcctgtcgtgtgtggtccgactgaaagaa
cgctacggcgtcgctcacaccgtgaaggtcctcaccggatcgaaagatcaaaaggtcatc
caagccggtcacgatcagctcagcacctacaacctgctttccaacgaaggtgccaacgcg
gttcgcacctggatcgaacaactcatttcgcaaaaccatttgatccgaaccggcgagtat
caatcccttcgattgaccgaatcaggtcgcgcgttgctcaaacgcgaaggcgatgtgacg
ctcaccaaggtgagccagaaaagctcgtctcgccaacctgccgccaatgcatcctgggaa
ggcgtcgaccgtcaattgttcgatcacttgcgtgcgctccgcagcgaaatggcgtccgaa
cgaggcgtgccggcttacgtcatcttcggcgacgcggtgctgcgggaattggctcgcgtg
cgccccacgtcgatcgacaaactcacccccattcgcggcatcggcgatcgcaaacgagaa
gaatttggccagctgttcctggactcgatcgatcaatactgcgagaaaaacccgctcgcc
agggaccaatccgacaacacggccccagcgccgatcaaccaaccgcgagcgaacaccgcc
ccaaacgcggcgatggtccaagccttccaactttttcgggacgggcgatccgcctccgaa
gttgcagaaaagatgggtcgcgccgaatcgaccgtgagcaagtatctcagcgatttcatc
caatccgaaaacatcaccgatccaacgcagtgggtccccaaagaagaagccgaagcaatc
cgggcggcccttctggcagccgaggacgaacggcttcgaccggtgttcgaagccttgaat
gaagagatgtcttacgaaaagatccgcatcgtcgccacgtgcatgaagaacgaaatggct
gacgatgcggacgattga
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