Rhodopirellula sp. P2: PSR62_12235
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Entry
PSR62_12235 CDS
T10699
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rhoi Rhodopirellula sp. P2
Pathway
rhoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSR62_12235 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhoi03019
]
PSR62_12235 (pnp)
03016 Transfer RNA biogenesis [BR:
rhoi03016
]
PSR62_12235 (pnp)
Enzymes [BR:
rhoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PSR62_12235 (pnp)
Messenger RNA biogenesis [BR:
rhoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PSR62_12235 (pnp)
Transfer RNA biogenesis [BR:
rhoi03016
]
Prokaryotic type
tRNA degradation factors
PSR62_12235 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
S1_RRP5
KH_KhpA-B
Helicase_C_2
KH_2
DUF2017
Motif
Other DBs
NCBI-ProteinID:
WDQ19269
LinkDB
All DBs
Position
complement(3455228..3457501)
Genome browser
AA seq
757 aa
AA seq
DB search
MSIQKVRVERKIGDSVLSFETGHIAKQAAGSVLVQYGETVVLVAAASGTPRPGIDFFPLM
CDYRERLAAAGKFPGGFLKREGRPSTKEILSSRLMDRPIRPLWPEGYKDEVQVQACVIAS
DLQNDGDVLAMIGGATALHISPLPFKGPLGSVRVGKVDGKLVAFPTADQLEQSELDMIVS
GSRDMVAMIEGFANEMPEDEMMEAIGFAHDVIREVIDLQEELYQKVNPEKTPYQAPEDDG
LLQRLTDTYYNDFKAAQQTSGKQARAEAVRAVRDRAMADVIPDPNASDAVCSNRFKSVWH
DLEEKVVRDLILAGTRPDGRDHNSLRAIHCETDLLPRVHGSALFQRGETQALITIALGTS
RDEQRVDGLQDEFSKKFMLDYNFPSYSVGECRPIRGPGRREIGHGCLAERSVSPVLPSAD
DFPYTIRVISDITESNGSSSMASVCGATLGLMASGVPISNPVAGISVGLVQDGPDNWCLI
TDILGTEDHFGDMDFKIAGTQNGITGIQLDLKVTGVTNEIIRATLKQSREARIEILKKML
TTIPRPRREISPTAPRLLRTKISPDKIGALIGPGGKNIRGIQESTGAVIEVDDEGTVLVA
SSNKESAQEAMRQVEACTATVQIGKIYDGTVSSIKEFGAFVEILPGRDGLVHISEMSGGY
ISSLDQVIAVGDAMKVLVIDVDEHDRVKLSRRKALEELGEEDPLATEGEGGGSGDSEGGG
DGEDRPRRRRGSSSGSGGSGGGGGRGRGPRRSGGGRD
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
gtgagtattcaaaaagttcgcgtggagcgaaaaattggtgattcggtgctgtcgttcgag
acagggcacatcgccaaacaagccgccggcagtgtgctggttcaatatggcgaaaccgtt
gtgctggttgcagccgcatcgggcacgccgcgtccgggaatcgatttcttccctttgatg
tgtgactaccgcgagcgtttggctgcggctggtaaattcccgggtggcttcctgaaacgc
gaaggccgtccaagcaccaaagaaatcctcagctcgcgtttgatggatcgcccgatccgc
cccctgtggcccgaaggctacaaagatgaagttcaagtccaagcttgcgtgatcgccagc
gacttgcaaaacgatggcgacgtgctggccatgatcggtggagccaccgctctgcacatc
agccccctgccattcaaaggccctctgggcagcgttcgtgttggcaaagtggacggcaaa
ttggtcgccttcccaaccgcggatcaactcgaacaaagcgagttggacatgatcgtcagc
ggcagccgtgacatggttgccatgatcgaaggcttcgccaacgaaatgcccgaagacgag
atgatggaagcgattggattcgctcacgacgtcatccgcgaagtcatcgacctgcaggaa
gagctgtaccaaaaggtcaacccagaaaagactccttaccaagctcccgaagacgacggg
ttgctccaacgtctgaccgacacttactacaacgacttcaaagctgcccagcaaacatcg
ggcaaacaggctcgcgccgaagccgttcgtgccgttcgtgatcgtgcgatggctgacgtc
attcctgaccccaacgcgtcggacgccgtttgcagcaaccgcttcaaatcagtctggcac
gacctcgaagaaaaggtcgttcgcgacctgatcctcgctggcacccgccccgacggtcgc
gaccacaactcgcttcgcgctatccactgcgaaacggacttgttgccacgcgttcacggt
tcggctctgttccaacgtggcgaaacccaagccctgatcacgatcgccttgggaaccagc
cgcgacgaacaacgcgtcgatggcctgcaagacgagttcagcaagaagttcatgctggac
tacaacttcccctcgtactcggttggcgaatgccgtccgatccgtggtcctggacgtcgt
gaaatcggacacggttgcttggccgaacgaagcgtgtcgccagtgcttccttccgccgac
gacttcccctacacgattcgcgtgatcagtgacatcaccgaatccaacggcagctcctcg
atggcttccgtttgtggtgcaacactcggcctgatggcctcgggcgttcccatcagcaac
cccgtcgctggtatctcagttggcttggtccaagacggccctgacaactggtgcttgatc
accgacatcctcggaaccgaagatcacttcggcgacatggacttcaagatcgctggtacc
caaaacgggatcaccggcattcagttggacctgaaagtcacgggagtcaccaacgaaatc
atccgcgccacgctgaaacaatcgcgtgaagctcggatcgaaatcctgaagaaaatgttg
acgaccattccgcgtcctcgtcgcgaaatctcgccaaccgcaccacgcttgcttcgcacc
aagatctcgcccgacaagatcggtgccctgatcggccctggcggcaaaaacattcgtgga
atccaagagtccaccggtgcggtcatcgaagtcgatgacgaaggtaccgtcttggtcgcc
agcagcaacaaagaatcggctcaagaagccatgcgtcaagtcgaagcctgcacggccacc
gttcagatcggcaagatctacgacggaaccgtcagcagcatcaaagagttcggtgcgttc
gttgaaatccttcccggtcgcgatggactcgttcacatcagcgaaatgagtggcggatac
atcagcagcctggatcaagtgatcgccgttggcgacgccatgaaggtcctggtcatcgat
gttgacgagcacgatcgcgtgaagctcagccgtcgcaaagcgctcgaagagctgggcgaa
gaagatcccttggccacggaaggtgaaggcggaggcagcggcgacagcgaaggtggtggc
gacggagaagatcgcccacgtcgtcgacgcggcagcagcagtggaagtggcggaagcggt
ggaggcggaggtcgcggacgcggcccacgtcgaagcggcggcggacgcgactga
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