Rhodopirellula sp. P2: PSR62_13335
Help
Entry
PSR62_13335 CDS
T10699
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rhoi Rhodopirellula sp. P2
Pathway
rhoi00040
Pentose and glucuronate interconversions
rhoi01100
Metabolic pathways
rhoi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhoi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PSR62_13335
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSR62_13335
Enzymes [BR:
rhoi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PSR62_13335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-ProteinID:
WDQ14627
LinkDB
All DBs
Position
complement(3784453..3785448)
Genome browser
AA seq
331 aa
AA seq
DB search
MNDHPSNPRLAGLLSLFFAAFVWTSLASAEESDAPIGWASVSGRGVETTTGGRNGDVVTA
RTAEELAEYASRPEPLTILIEGAITGDGQIKIASNKTLLGLGASTSLKNIELNMSGVSNI
IIRNLHISDARDAIALRRTHHAWIDHCNLSECGDGLLDITNQSDFVTVSWTRFSKHHKTM
LINSGTSQPEDSGYLNTTIHHCWFDGSDTRNPRVGYGKVHVFNCLYSKNDYGIGLHSQCL
VLAQRNHFDQVKHPIKQMYRPDPTDIHHGFCESVGNIFQNCRGAQDDEGKSFPAKEFYEY
ESKMDDVARVPEIVQSNAGPQEHIGRTASRQ
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatcatccgtccaatccgcgacttgccggacttctatcgcttttcttcgccgcc
ttcgtgtggacgtcgctcgcgtccgccgaggaaagcgacgctcctatcggatgggcctcg
gtcagtggccgtggagtcgaaacgaccactggtgggagaaacggtgatgtcgtgacagcc
cgcaccgcagaggagttggccgagtacgcgtcccgccccgaaccactgacaattttgatc
gaaggagcgatcaccggagacggtcaaatcaagatcgcgtccaacaaaacactgcttggt
ttgggagcatccacatcgctcaaaaacatcgaactgaacatgagcggtgtttcgaacatc
atcattcgcaacctccacatctcggacgctcgcgatgcgatcgcgctgcgtcgaacccac
catgcgtggatcgatcactgtaacctctcggaatgcggcgacggcttgctcgacatcacc
aaccaatccgacttcgtgaccgtttcctggactcgattctcaaagcatcacaagacgatg
ctgatcaacagcggcaccagccaaccggaagattcaggttacctcaacaccaccatccat
cattgctggttcgatggttccgacacccgcaaccctcgggtgggttacggcaaggttcac
gtgttcaactgcctttactcaaaaaatgattacggaatcggattgcactcacagtgcttg
gtactcgcccaacgcaatcactttgatcaagtgaagcatccgatcaaacagatgtatcgc
cccgatccaacggacattcaccatggtttctgcgagtcggtggggaacatcttccagaac
tgcaggggagcacaggacgacgagggaaagagctttcccgcgaaagaattttacgaatac
gaatccaagatggatgacgtggcccgtgtaccggagattgtccaatccaacgcgggcccc
caagaacacatcgggagaacagcgtcgcgacagtga
DBGET
integrated database retrieval system
