Rhodopirellula sp. P2: PSR62_17235
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Entry
PSR62_17235 CDS
T10699
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
rhoi Rhodopirellula sp. P2
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
HTH_23
Sigma70_r4
HTH_28
HTH_29
HTH_Tnp_ISL3
HTH_Tnp_1
STN
DUF746
Motif
Other DBs
NCBI-ProteinID:
WDQ15376
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Position
4851653..4853836
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AA seq
727 aa
AA seq
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MPSGNFTIDTAAPIPPPIAPDVRQVQSRDHPDDPAAAARWDGLNPTDADLLDAWVTDNCL
EALDTLVRRYAQMVLSVCIRRCHDRTDADDAMQTTFLYLAQSAKKIRDPNRLAGWLHRVA
QRASIATMMSPERTHQDLSDVPSTPVDPLERLTLRHQAIVLDEELSELPEKYRSAIVLHL
QQGVTVSETARQMGASEGSVRGWLARGKQRLARQLRLRGVAPMAAWAAAHAWSVSETMAA
QAAFELTCPPDLGTTPDPDVPPGAGSGNSNWPHSTSTSHFSALESHLTQGITTMPVVTIL
GSTAAVGLALLVAFAVPVGNDESGRSASVLTFATPDEESQSVLAQFSPGNASPDPNSPVP
TAPPQPAPPDVRSQLPRALPTPTTPPIPPTPPTPPLATSQVANRVTQTLDQPTTLAFESN
VRSLPETLQEAIRIPVLLDTQRMTLGEIDMDSLHVQFDAPAEQPLRTLLRKALEPAGLKG
VVDDDGLLITTDMTMLTRRGISTDRWLDVTPEQAKTIDEVMDKKVSYDFLETPLEDAVRV
ISEDLNFPILIDKLTLDEIGLTNDTPVDLSVQSISCRSFLRLLLHPMGLTYQYKDEVLQI
TTQEAGDERLRQRLYFLEGTGLPRGGDLGTIEMITSTIQPDAWEALGGYSTISSVNHSRE
GRPALLVSTTDDLHKEIEDLMLALRETHTGEDPRLSDEEFEQQQKKRMQANGGGMGGGGG
GGGGGMF
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcgggaacttcaccatcgacacagcggcccccattccgccgccgatcgccccc
gatgtccgacaggttcaatcacgcgaccatcccgacgatcccgccgcggcggcccgttgg
gacggactcaatccaaccgacgccgatctgctcgacgcgtgggtcacggacaactgtctc
gaagccctcgacactctggttcgacgttacgcccagatggttctcagcgtttgcatccga
cgctgccacgatcgcaccgacgccgacgacgcgatgcaaaccacttttttgtacctcgct
caatcagcaaagaagattcgagatcccaatcggctcgccggttggctgcaccgagtcgcc
caacgcgccagcatcgccaccatgatgtcacccgaacgcacccatcaggatttgtccgat
gttccctcgacacccgtcgacccgttggaacgtctgacacttcgccatcaagccatcgtg
ctcgacgaagagctctcagaactgccggagaagtaccgatccgcgattgtgctgcatctg
caacaaggcgtcacggtttccgaaacggcacgacaaatgggagcctcggaaggttccgtc
cgcggctggctcgctcgcggcaagcaacgcctcgcccgtcagcttcgacttcgcggggtc
gccccgatggcggcttgggcggcggcacatgcctggagcgtttctgaaacgatggctgct
caagccgcgttcgaactcacttgcccacccgaccttggtaccacccccgatccggacgtg
ccccccggtgcaggatctggcaattccaattggccccactccacatcgacttcccacttc
tctgctcttgaatctcatctgacacaaggaatcaccaccatgcctgtcgtcaccattctt
ggctccaccgctgcggttggactcgccttgttggttgccttcgccgtccccgtgggcaac
gacgaatcaggacgttccgccagcgtcctgaccttcgcgacaccggacgaggaatcccaa
tcggtcctcgcacaattctcaccgggcaacgcttcccccgatcccaactcgcctgttccg
accgcaccgcctcaaccagcgccgccggacgttcgctcacaactgccacgtgctctgcca
accccgaccaccccaccgattccaccgacgccgcccacaccgccattggcaaccagccaa
gtcgcaaaccgagtgacgcaaacactcgatcaaccgaccacattggcgtttgaatccaat
gtccgctcgcttccggaaaccttgcaagaagcgatccggatccccgtcctgctcgacacg
cagcgaatgacactcggtgaaatcgacatggacagcctgcatgtccaattcgatgcccca
gccgagcaaccgcttcgaacgctcttgcgaaaagcattggaacccgccggtttgaagggc
gtcgttgatgacgatggcctgttgatcaccaccgacatgaccatgttgactcggagaggc
atttcgacggatcgctggttggatgtgacgcctgaacaagccaaaacgatcgacgaagtc
atggacaaaaaggtttcctacgactttctggagacaccgctggaagatgctgtccgggtg
atttccgaagacctcaatttccccatcctgattgacaagctcaccctggatgaaataggt
ctcacaaacgacaccccggtggacctttcggtccagtccatttcttgccgttctttccta
cgcttgctgcttcaccccatggggctcacctatcaatacaaggatgaggtcttgcagatc
accacccaggaagccggcgacgagagacttcgacagcggttgtacttcctcgaaggcacc
ggtctgccacgcggaggcgaccttggaacgattgagatgatcacctccaccatccagccc
gatgcctgggaagcactcggaggctactccaccatcagttccgtcaaccattcgcgagaa
ggccggcccgcgttgctggtcagtacaaccgacgacctccacaaagaaatcgaagacctg
atgcttgcccttcgcgaaacgcacaccggtgaggacccccgtttatccgacgaagaattt
gagcagcaacagaagaagagaatgcaagcgaacggaggtggaatgggaggaggaggagga
ggaggaggaggaggaatgttctga
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