Rhodopirellula sp. P2: PSR62_17260
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Entry
PSR62_17260 CDS
T10699
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
rhoi Rhodopirellula sp. P2
Pathway
rhoi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rhoi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSR62_17260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhoi03000
]
PSR62_17260
Transcription factors [BR:
rhoi03000
]
Prokaryotic type
Helix-turn-helix
Other families
PSR62_17260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FHA
HTH_8
AAA_5
Yop-YscD_cpl
AAA_16
Xre-like-HTH
AAA
AAA_2
AAA_30
RsiG
Motif
Other DBs
NCBI-ProteinID:
WDQ15381
LinkDB
All DBs
Position
complement(4860337..4862565)
Genome browser
AA seq
742 aa
AA seq
DB search
MTSKSNTTEPDAAPAKSPPDAYLVVHRGMRWTDVIRLSGDMRWTIGRSSSNPIVLRSAQS
SRQHAEIRPAITPEGPVWAIVDLNSRNGVQVNSRRIKAPTVLKEADRLKIAGFELTFTRN
PATLTRPPVRNSAAPGATSPNGSGSGDDGATQDNLGGDWQAECADDDGDNGESEVDVVSQ
IMSSGLAGRLNREASRAREGEPTHSDAVDPLLAMAFALGRAESIEECGETLMQTLEDLMP
GSTIGLYLFDAEQKAALLDGAGLAPPRLVRQPAGTRYRRPPTPLIQPILQPESAAILARN
VLGDRRLATENTAGEIDVESIILAPLRPAVAENRDGASAEPNALLREKSLPVGLVHVTTP
AGNPALTPNQLRNVVAAGEIFCQAIRSVHREASLTRSLKKSEAVISRLRRQLAGRIQILG
NSEPIRLVQQQIAQVAPTPSVVLVRGESGVGKELVASAIHHAGPRRDGPLVCLNCAALSK
DLLESELFGHEEGAFTGATQQKRGKFEVASGGTLMLDEIGEMSLDLQAKLLRVLEGHPFE
RVGGQSPIQTDVRVVAATHRDLRAMVEQNTFREDLFYRLNVVEILVPPLRERGRDVILLA
NHFLQSFAESMARGRLKFTALAEKKLQRHRWPGNVRELRNVIERAVVMSPMDAGGDGNVI
ELDADDLLITPVAGPSKDGTSKTGRSGSIDDESELSLAELEMRHIRRVLESTGGNKSRAS
TILGIERSTLDRKLKKAQKNAS
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
gtgacaagcaaatctaacacaactgaacccgacgctgctccagcgaaatcgcctccagac
gcctatttggtggttcatcgcggtatgcgctggacggatgtgattcggttgtctggggat
atgcgttggacaatcggccgctcgtcgtccaatcccatcgtgcttcgcagcgctcaatcc
agccgccaacacgccgagattcgacccgcgatcactcctgaaggccctgtttgggcgatt
gtggacctgaattcgcgtaacggggtgcaggtcaattcccgacggatcaaggccccgaca
gtgctgaaggaggccgaccggctgaagattgctggcttcgaactgacgttcacccgcaac
cccgccacgctgacgcgtccccccgttcggaactccgcggcccccggtgcgacttccccc
aacggttctggctccggcgatgatggggcgacgcaagacaacttgggcggcgattggcag
gccgaatgtgcggatgatgacggtgacaacggcgagagtgaggtcgatgttgtctcccag
atcatgtccagcggtttggccggccgactcaatcgcgaagccagtcgagcgcgagagggc
gagccgacccattcggacgcagtcgatccgttgctggcgatggcgttcgcactggggcga
gcagaatcaatcgaagagtgtggcgagacattgatgcaaacgctcgaagatttgatgccg
ggttcgacgatcgggttgtacctgttcgacgccgaacagaaagcggctttgttggatggc
gctgggctggcgcctcctcgtttggttcgccaacctgctggcactcgttaccgccgtcct
ccaacgccactcattcaaccgatcttgcaaccggagtccgctgcgattctggctcgcaat
gttctgggcgaccgccgattggcaaccgagaacactgcgggagagatcgatgtcgaatcg
atcattctggcgccactgcggcccgcggttgctgagaaccgtgacggggcgtcggcggaa
ccaaacgctttgctgcgcgaaaaatctttgccggttggtttggttcacgtgaccaccccg
gcgggcaatcccgcgttgaccccgaaccaattgcgaaacgtggtcgcggcgggagaaatt
ttctgccaagcgattcgttccgttcaccgggaggcttcgttgacgcggtcgctgaaaaaa
tccgaggcggtgatcagtcggttgagacggcaattggccggtcgcattcagattctagga
aacagcgagccgatccgccttgttcaacagcagatcgcacaagtcgctccgacgccttcg
gtcgttttggtgcgaggcgaatcgggcgtgggcaaggagttggtggcgtcggccattcat
cacgccggtcctcgtcgcgatgggcccctggtgtgtttgaattgtgccgcactgtccaag
gatttgttggagtcggaactgttcggacacgaagaaggtgccttcacgggcgcgacccag
caaaagcgaggcaagtttgaagtcgcttccggcggcacattgatgctggacgaaatcggt
gagatgagcttggacctgcaagccaaattgcttcgcgttctggaagggcatccctttgaa
cgtgtcggtgggcagtcgccgattcagaccgatgtgcgagtggtggcggcgacgcatcgt
gacctgcgagcgatggttgagcagaatacgtttcgagaagacctgttttaccggctcaac
gtcgtcgaaatcttggtgccgccgctcagagaacgtggccgcgatgtgattttgctcgcg
aatcattttctgcaatcgttcgctgagtcgatggctcgcgggcgtttgaaattcacggca
ttggcagagaaaaaattgcaacgccatcgctggcccggcaatgtgcgtgagctccggaac
gtgatcgagcgagccgtcgtgatgtcgccgatggatgctggcggtgacggcaatgtgatc
gagctggacgctgacgatttgctgatcacgccggtcgccgggccatcgaaagacggcacg
tcgaagaccggtcgctcaggcagcatcgacgatgagtcggaactttcgctggcggagttg
gagatgcgacacattcgacgagtgttggaatccactggcgggaacaagagtcgcgcgtca
acgattctaggaatcgaacgcagcacgttggaccgcaagctgaagaaagcccagaagaac
gcgagctaa
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