KEGG   Rhodopirellula sp. P2: PSR62_18260
Entry
PSR62_18260       CDS       T10699                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rhoi  Rhodopirellula sp. P2
Pathway
rhoi00010  Glycolysis / Gluconeogenesis
rhoi00020  Citrate cycle (TCA cycle)
rhoi00260  Glycine, serine and threonine metabolism
rhoi00280  Valine, leucine and isoleucine degradation
rhoi00310  Lysine degradation
rhoi00380  Tryptophan metabolism
rhoi00620  Pyruvate metabolism
rhoi00630  Glyoxylate and dicarboxylate metabolism
rhoi00640  Propanoate metabolism
rhoi00670  One carbon pool by folate
rhoi00785  Lipoic acid metabolism
rhoi01100  Metabolic pathways
rhoi01110  Biosynthesis of secondary metabolites
rhoi01120  Microbial metabolism in diverse environments
rhoi01200  Carbon metabolism
rhoi01210  2-Oxocarboxylic acid metabolism
rhoi01240  Biosynthesis of cofactors
Module
rhoi_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rhoi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhoi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rhoi_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rhoi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PSR62_18260 (lpdA)
   00020 Citrate cycle (TCA cycle)
    PSR62_18260 (lpdA)
   00620 Pyruvate metabolism
    PSR62_18260 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    PSR62_18260 (lpdA)
   00640 Propanoate metabolism
    PSR62_18260 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PSR62_18260 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    PSR62_18260 (lpdA)
   00310 Lysine degradation
    PSR62_18260 (lpdA)
   00380 Tryptophan metabolism
    PSR62_18260 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PSR62_18260 (lpdA)
   00670 One carbon pool by folate
    PSR62_18260 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhoi04147]
    PSR62_18260 (lpdA)
Enzymes [BR:rhoi01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PSR62_18260 (lpdA)
Exosome [BR:rhoi04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PSR62_18260 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox HI0933_like Pyr_redox_3 GIDA FAD_oxidored NAD_binding_8 FAD_binding_2 DAO AlaDh_PNT_C Lycopene_cycl UDPG_MGDP_dh_N FAD_binding_3 Thi4 JetD_C
Other DBs
NCBI-ProteinID: WDQ15575
LinkDB
Position
5158616..5160040
AA seq 474 aa
MKTARHELVILGGGPAGYVAAIRAAQLGIDVACIDDNPRFGGTCVRVGCIPSKALLESSH
LYEEAQHKFADHGLNVGKLELDLGVMMKRKEKIVESLTGGIDMLFDRRGVTAYHGRGILR
DAETVEITPSEGATDDQPTLVTADQIMLCPGSVPAQLPFVEEDGDRIGNSTTALSFPEVP
EELVVIGGGYIGLELGSVWNRLGSHVVVLEAFDRIMPGLDKEMATLAHRSFKKQGMDIRT
GTFVASAKVVPKPGDKKPCVVEIKDGDPIRCDRVLLATGRAPATKNLGLENAGVKLDERG
FIQVNHQFETSVPGIYAIGDCIGGAMLAHKAMEEGVVCVEQMAGIASEMNYEVIPAIVFT
HPEIAMVGKTEEELKEAGIEYKKGVCPLGANGRARTLGDIDGRVKVLADATTDRVLGVHI
IGPRAGDMIAEAAAAMEFGASSEDIVHTCHAHPTLSEAVHEAAMAIDDRAIHTA
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgaaaacggctcgtcacgaactcgtcattttgggcggtggcccagccggttacgtcgct
gccattcgcgcagctcaactgggcatcgacgttgcctgcatcgacgacaaccctcgcttc
ggcgggacctgtgtccgagtcggttgcattcccagcaaggcgttgttggaatcgagccac
ttgtacgaagaagcccagcacaaatttgcggaccacgggctgaacgtcggcaagctggag
ttggacctcggcgtgatgatgaaacgcaaagagaaaattgtcgaatcgctgaccggcggc
atcgacatgctgttcgaccgccgtggcgtgaccgcttatcacggccgaggcatcctccgc
gacgccgaaaccgtcgaaatcacccccagcgaaggggcgactgacgaccaaccgaccttg
gtcaccgccgatcaaatcatgctctgccccggcagtgtgcccgcccaactgccgttcgtc
gaagaagacggcgatcgcatcggcaacagcaccaccgcactctcctttcccgaagtgcca
gaagaactggtcgtcatcggcggcggctacatcggcttggaactgggcagcgtctggaat
cgactgggcagccacgttgttgtcctggaagcctttgatcgcatcatgccagggctcgac
aaagagatggccaccttggctcatcgcagcttcaaaaaacaaggcatggacattcgcacc
ggaacgtttgtcgcctccgccaaagtcgttcccaaaccgggcgacaagaaaccctgtgtc
gttgaaatcaaagacggcgatccaattcgctgcgaccgcgtcctgctcgcgaccgggcgt
gctcccgcgaccaagaacttgggccttgaaaacgcaggcgtgaaattggacgagcgtggc
ttcatccaagtcaaccatcagttcgaaacgtcggtcccaggcatctatgccattggcgat
tgcatcggcggcgcaatgctggctcacaaagccatggaagagggcgtcgtctgcgtcgaa
caaatggccggcatcgcttcagaaatgaactacgaagtcatccccgcgatcgtcttcacc
catcccgaaatcgcgatggtcggcaagaccgaagaagaactgaaggaagccggcatcgaa
tacaaaaagggcgtttgccctctgggtgccaacggacgcgcccggacgctgggtgacatc
gacggccgcgtcaaagtcctggcggacgccacgacagaccgagtcctcggcgttcacatc
atcggcccgcgtgctggcgacatgatcgcggaagccgctgcggccatggaatttggtgcc
agcagcgaagacatcgtgcacacctgccacgctcacccgacgttgtccgaagcggttcac
gaagccgccatggccatcgacgaccgagcgattcacacggcgtga

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