Rhodopirellula sp. P2: PSR62_21430
Help
Entry
PSR62_21430 CDS
T10699
Name
(GenBank) cadherin domain-containing protein
Organism
rhoi Rhodopirellula sp. P2
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Big_9
Planc_extracel
Motif
Other DBs
NCBI-ProteinID:
WDQ16168
LinkDB
All DBs
Position
6076142..6082453
Genome browser
AA seq
2103 aa
AA seq
DB search
MKPVVQRLLARLSSKQSRNSRHKNRYLGSSDRRLKVESLESRRVLAATIASFAPTPSGFT
AELSEEVSIPQLSLYDTEAGDAGAADVTLQGATTGEVRGSLVVNGTTVTFIATDGPLAAD
TYTATLRSASDGFTDLADGELLDGDGDGTAGGNYVTTFTVASPAALVVGLPDIVRGPSQT
VQLPVGGSGTELPAGLPIQLSNADGVTSVTLTIQYDPAMLDISGVQLGEDAPTGSQVEAN
LDTPGVATITFFSLEAMDAGQADIIDLIATIPEDAPYGSTGTLTISSLEVNAGGMTATAD
DAIQVVAFPGDVNANRRYDAEDARLVARVGVDLDTGFVITDATGSGEAFVPFAAIDPDLL
GDVTGQDGLSPLDASDLLRRVVGLSTPNIPDLPDAQAPTSISLSTTTVAENLAVGTAVGT
FSSTDPDSGDTHTYALVSGTGSTDNSSFTISGNTLVTAEVFDASVQDTYTIRVQTTDSTG
RTLERVFTLTVTDQNVAPTAISLSDTSIAENETASTAVGDLSTTDSNTGDTFTYSIVSID
GSTTDTTFAISGNSLVATGSLDFETKSSYSVVVRTTDQGGLSFDQTFTINVADINEAPTA
IALSDDSIADDSVSGTVVGSFTTTDVDASDSFTYSLVSGTGDTDNASFTIVGNELRTATT
IDFDTQSSYSIRIQTTDSGGETFEQVFTIVQSNEGPTAITLSDSSVAENGSAGDTVGTFS
STDPTSGDTFTYTFATGEGDDNNALFAISGNELQAAGSLDAETQGTLTIRVRSTDSTGEF
IEETFTITVSSVNEAPTTLTLSGTHVATGEASGTVVGTLGTDDPDVGDTITYTLVSGTGD
TDNASFTISNGELITAFAANQSTQSSYSVRVQAQDADGLSTEETFTITITSTNVAPTAIA
IDNNEVEENADVGATVGTLSTTDPNAVDSFIYTLVSGSGDTDNALFAIDGNDLVTATSLD
FETQSSYSVRIQSTDPFGLSTVETFTITATDVNDAPTAIAIDNSSVSEDTASGTTVGAFS
TTDADASDTFTYTLVSGDGDTDNAAFTIDGGNLVTATTFDFATQSSYSIRVQTEDSAGAT
FVQILTITITESEANVAPTAISIDNTDIEEHATVGTTVGTLSTTDANASDTFTYALVSGE
GDTDNAAFTIDGSNLVTANSFDFETQSSYSIRVQTTDSGGATFEQTLTLSVTDSNDAPTS
LALDNSTIAEDVASGTTVGELSTTDADAGDTFTYELVSGDGDTDNAAFSIDGSNLVTATT
FDFDTQSSYSVRIKSTDSNGATITQVLTITITDTSVNAAPTAIAIDNSSLAEDAASGTTV
GELSTTDADAGDTFSYALVSGDGDTDNAAFSIDGSNLVTATTFDFDTQSSYSVRIRTTDS
AGANFEQALTITITETSTNAAPTAIAIDNSSIAEDAASGTIVGALSTTDADAGDTFTYAL
VAGDGDTDNAAFSIDGSNLVTATTFDFDTQSSYSVRVQTTDSAGATFEQSLTITITETST
NAAPTAIAIDNSSLAEDAASGTIVGALSTTDADAGDTFSYALVAGDGDTDNAAFSIDGSN
LVTATTFDFDTQSSYSVRIRTTDSAGANFEQSLTITITETSTNAAPTAIAIDNTSVAEDA
ASGTIVGALSTTDADAGDTFTYALVAGDGDTDNAAFSIDGSNLVTATTFDFETQSSYSVR
VQTTDSAGATFEQALTITVTNVNEDPTAISISSSVVTEESASGTTVGSFSTADVDASDTF
TYTLVAGDGDTDNASFTLDGEDLLTATTLDMATQSSYSIRVRSTDAEGSFVEQTFTITVT
DTNAAPTAIALDDTAVAENAAIGTVVGALSTTDADVADTFTYSLVSGVGDTDNGLFAIDG
ENLVTAATFDFESQSSYSVRIQSTDAVGATIGQSFLITVTDVNEAPTGLSLAFPAIASGQ
ASGFLVGDLGAVDPDAGDTFTFEFVSGDGDLDNDKFTLVDGALRTAEATDDAIQALYSIR
VRVTDSGGLTFEDTADLIVSEENVAPTGILLDNSTVADGSLSGTTVGNLSATDANDFDEH
TFELVAGTGGTDNASFTIVDGVLQTNFDADESAQSSYSIRVLSTDRYGLAVEEVLTITIE
TTV
NT seq
6312 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccagttgtccagcgtctcctcgctcgcctgagttcgaaacaatcccgcaattcc
cgccataagaaccgatatctcggatccagtgatcgacgattgaaggtggaatcgttggag
tcacgtcgggtgttggctgccacgattgcttccttcgctcccaccccatcgggcttcacc
gctgaactgagtgaagaagtcagcatccctcaactcagcctttacgacacggaagccggt
gacgccggtgcggccgacgtgacattgcagggtgccacaaccggcgaagtgcgtggttca
ctcgttgtaaacggcacaaccgttacattcatcgcaaccgatggaccgctcgcagcggac
acctacacggccacccttcgaagtgccagtgacggattcacggacctcgccgacggcgaa
cttctggatggcgatggcgacggaacggcgggtggcaactacgtcaccacgttcacggtt
gccagccccgccgcgttggtcgtgggattgcccgacatcgttcgcggccccagccaaacg
gttcagttgcccgtcggcggcagcggaaccgagttgccagccggattgcccattcaactc
agcaacgccgatggcgtgacctcggtgacgctgacgattcagtacgatccggccatgctg
gacatctccggtgtccaactgggcgaagacgcccccaccggaagccaagtcgaagcgaac
ctggacacccccggtgtcgccacgatcaccttctttagcctggaggcaatggacgccggc
caagctgacatcatcgatctgatcgcgaccattccagaagacgctccatacggttcgacg
ggaaccttgacgatcagttccttggaagtgaatgccgggggcatgaccgccaccgcggac
gatgccattcaagtcgtcgcgtttcccggcgacgtcaatgcaaaccgccgctacgacgca
gaagacgcgcgtttggttgctcgagtcggagtcgatctggacaccggcttcgtcattacc
gatgcgaccggatcgggcgaagccttcgttcccttcgcagcaatcgaccccgatttgctc
ggtgatgtgacgggacaagacggattgagccccttggatgccagcgacctgctgagacgg
gtcgttggtttgtcgacgccaaacattcctgacttgccggatgcccaagcaccgaccagc
atcagcctctccaccaccaccgtcgcagaaaacttggcggttggaaccgcggttggaacg
ttctcctcgaccgatccagactcgggtgacacgcacacctatgccttggtttcaggaacc
ggcagcaccgacaacagttcgttcaccatctcgggcaacaccttggtgaccgccgaagtg
ttcgacgcatccgttcaagacacctacaccatccgtgttcaaaccacggactcgaccgga
cgcacactggagcgtgtcttcacgctgacggttaccgatcaaaacgtcgctcccacggca
atctcgctgagcgacacatcgatcgctgaaaacgagacggccagcacagcggttggcgac
ttgtcgaccaccgacagcaacaccggcgacacgttcacctacagcatcgtctccatcgac
ggcagcaccacggacaccaccttcgccatttccggcaattcgttggtcgccacgggatcc
ctcgacttcgaaaccaagagcagctactccgtcgttgttcgcacaaccgaccaaggcgga
ttgtcatttgatcagaccttcacgatcaatgtcgctgacatcaacgaggcgcccaccgca
atcgctttgagcgacgattcgattgcggatgattcggtgtccggaaccgtggttggatcc
ttcaccaccaccgacgtggatgcctccgactcgttcacttattcgttggtctccggcacg
ggtgacaccgacaacgcttcgttcaccatcgtgggcaatgaactgcgaaccgcgacgacg
atcgacttcgacacgcaaagcagctacagcattcggattcagacgacggattcaggcggc
gaaacgttcgagcaagtcttcacgatcgttcagagcaacgaagggccgaccgcgatcaca
ctcagtgattccagcgtcgctgaaaatggatcggcgggagacaccgttggcaccttcagc
tcgaccgacccgacatctggggacacattcacctacaccttcgcgaccggagaaggtgac
gacaacaatgcgttgttcgcgatttcgggcaacgaattgcaagctgctggatcgctggat
gccgaaacacagggcacgctgacgattcgcgttcgcagcaccgactcgaccggcgaattc
atcgaggaaaccttcacgatcacggtctccagtgtcaacgaagcaccgaccacgctcacc
ctgtccgggacccacgtcgccaccggcgaagcaagcggaacggtggtcggaaccctggga
accgacgatcccgacgtcggtgacacgatcacctacaccttggtttccggaaccggtgac
accgacaacgcctccttcacgatctccaacggagaactgatcaccgcgtttgctgccaac
cagtcaacgcagtcgtcttactcggtccgagtgcaggctcaagacgctgacggtctttcc
accgaagaaaccttcaccatcacgatcacgtccacgaacgtggcccccaccgcgatcgcg
attgacaacaacgaggtggaagaaaacgcagatgttggcgccactgtcggcactctcagc
acgaccgatcccaatgcggtggattcgttcatctacacgttggtgagcggttcgggtgac
accgacaacgcattgtttgcgatcgacggcaacgatttggtgaccgccacgtcactggac
ttcgaaacccaatcgtcttactcggttcgcatccaaagcaccgacccgttcggtttatcg
accgtggaaaccttcacgatcactgccacggacgtgaacgacgctccaactgcgatcgcg
atcgacaacagcagcgtttcggaagacaccgcctccggaaccaccgtgggtgccttcagc
accaccgacgccgatgcgtcggacaccttcacctacaccttggtcagtggcgatggggac
actgataacgccgccttcaccatcgacggtggaaacctggtgacggccaccacgttcgac
ttcgccacccagtcgtcctactcgattcgagttcaaaccgaggattctgcgggagccacg
tttgtacaaatcttgacgatcaccatcaccgaaagcgaagccaacgtcgcgccgaccgcg
atttcgatcgacaacaccgacatcgaggaacatgccacggtcgggaccaccgtcgggacg
ctcagcaccaccgacgcgaatgcttcggacacgttcacctacgccttggtcagtggcgaa
ggcgacacagacaacgccgctttcaccatcgatggcagcaacctcgtcacggcaaactcc
ttcgacttcgagactcaatcctcttactcgattcgggtgcaaaccacggattccggtgga
gccacgttcgagcaaaccctgactctgtccgtgacggattccaacgacgcgcccacctca
ctggcactggacaactcgacgatcgctgaagacgtcgcctcgggaacaactgtcggcgaa
ctcagcaccaccgacgcggatgccggagacaccttcacctatgaactggtcagtggcgat
ggcgacaccgacaacgctgccttcagcatcgacggcagcaacctggtaacggcgaccacg
tttgacttcgacacccagtcgtcctactcggtccgaatcaaatccacggattcgaatggc
gcgaccatcacccaagtcctgacgatcacgatcaccgacaccagcgtgaacgcggccccc
actgcgatcgcgattgacaacagtagcctcgccgaagacgccgcctccggaaccacggtt
ggcgaactcagcacaaccgacgcggatgccggcgacaccttctcgtacgctctggtcagt
ggcgatggtgacactgacaacgcggccttcagcatcgacggcagcaacctggtcaccgcg
accacgttcgacttcgacacccagtcgtcctactcggttcggattcgaacaaccgattcg
gccggagccaactttgagcaagccctgacgatcacgatcacggaaaccagcaccaacgcg
gctccaacagcgatcgcgatcgacaacagcagcatcgccgaagacgccgcttcgggaacc
atcgtcggtgcactcagcacaaccgacgcggatgctggcgataccttcacttacgccttg
gtcgctggcgatggagacaccgacaacgcggccttcagcattgacggcagcaacctggtc
accgcaaccacgtttgacttcgacacccagtcgtcctactcggttcgtgttcaaacgacc
gactcagccggagcgaccttcgaacaatctctgacgatcacgatcacggaaaccagcacc
aacgcagctccaacagcgatcgcgatcgacaacagcagcctcgccgaagacgccgcttcg
ggaaccatcgtcggtgcactcagcacaaccgatgcagatgccggcgacaccttctcgtac
gccttggtcgctggcgatggagacacagacaacgcggccttcagcatcgacggcagcaac
ctggtcaccgcgaccacgttcgacttcgacacccagtcgtcctactcggttcggattcga
acaaccgattcggccggagccaactttgagcaatctctgacgatcacgatcacggaaacc
agcaccaacgcggctccaacagcgatcgcgatcgacaacaccagcgtcgcggaagacgcc
gcgtcgggaaccatcgtcggtgcactcagcaccaccgacgcggatgctggcgataccttc
acttacgccctggtcgctggcgatggagacacagacaacgcggccttcagcattgacggc
agcaatctggtcaccgcgaccacgttcgactttgagacccaatcgtcctattccgttcgt
gttcaaacaactgattcggctggagcaacttttgagcaagccctgacgatcaccgtcacc
aatgtgaacgaggatcccaccgcgatttcgatcagcagtagcgttgtcaccgaagaatca
gcctcgggcaccacggtgggttccttcagcaccgccgacgtcgatgcctcagacaccttc
acctacaccttggtcgctggtgatggggacaccgacaacgcatccttcactctcgatggg
gaagatttgctgaccgccacaacgctcgacatggccacacaatcgtcctactcgattcga
gtgcgaagcaccgacgccgagggatcgtttgtggagcaaacgttcacgatcaccgtgacg
gataccaacgcagcccccactgcgatcgcacttgacgacacagcggtcgctgaaaacgcg
gccattggaaccgtcgtcggtgcactcagcacgaccgacgcggatgtcgccgatacgttc
acgtattccttggtcagtggtgtgggtgacaccgacaacggattgtttgcgatcgatgga
gaaaacctggtgaccgccgcgacgtttgactttgaatctcaatcgtcgtattccgttcgc
attcaaagcaccgatgccgtcggagcaacgatcggccaatccttcctgatcaccgtcacc
gatgtcaacgaagcccccaccgggttgagcttggcgttccctgcgattgccagcggtcaa
gccagtggattccttgttggagatttgggggcggtcgatccagacgccggcgacaccttc
accttcgaatttgtttcgggcgatggcgacctcgacaatgacaaattcacgctggtcgat
ggggcattgcgaaccgcggaagcaaccgatgatgccatccaagctctctactcgattcgc
gttcgcgtgaccgattccggtggactcacctttgaggacacagcagacttgattgtctcc
gaagaaaacgtcgcaccgacgggcatcctgctggacaacagcaccgtggccgatggttcg
ttgagcggcacgacggtcggaaacttgtctgccaccgacgccaacgacttcgacgaacac
acgttcgaattggtcgccggaaccggtggcactgacaacgcatcgttcaccatcgttgac
ggtgtattgcaaaccaacttcgacgccgacgaatcagctcaatccagctatagcattcgc
gtcttgtcaactgaccgctacggattggccgtcgaagaagtgctcacgatcaccattgag
accactgtgtga
DBGET
integrated database retrieval system
