Rhodopirellula sp. P2: PSR62_23485
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Entry
PSR62_23485 CDS
T10699
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rhoi Rhodopirellula sp. P2
Pathway
rhoi02024
Quorum sensing
rhoi03060
Protein export
rhoi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rhoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PSR62_23485 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PSR62_23485 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSR62_23485 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rhoi02044
]
PSR62_23485 (ffh)
Enzymes [BR:
rhoi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PSR62_23485 (ffh)
Secretion system [BR:
rhoi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PSR62_23485 (ffh)
Eukaryotic Sec-SRP protein
PSR62_23485 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
AAA_30
AAA_18
AAA_16
AAA_33
ATP_bind_1
AAA_17
APS_kinase
KTI12
Zeta_toxin
Thymidylate_kin
nSTAND_NTPase5
AAA_19
ABC_tran
6PF2K
TctA
NPHP3_N
AAA_5
ScmC
Motif
Other DBs
NCBI-ProteinID:
WDQ16556
LinkDB
All DBs
Position
6682077..6683552
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AA seq
491 aa
AA seq
DB search
MFDSLSDGLQSAFKSLSGKGKLTEGNMRDGLKIVEQSLLEADVSYSVVQDFMGHVSEKAL
GKRVLLSLRPQEELVRIVYDELVETLGPVDSALNLKADGPTIIMLCGLQGSGKTTTCGKL
TKLLQEQNITPLLVAADLQRPAAIEQLKVIGSQLGVPVHAETDHKDPVKVCQTGVEMARR
DGNRVVILDTAGRLAIDAELMAELKKIDRKVGPDQVYLVVDGMTGQDAVNSAGAFNDALE
LDGVVMTKLDGDARGGALLSVKQVTGVPIKFMGTGEHFDALEPFRPEGMASRILQMGDIV
AAAREAHRIVDEDEREELEAKMASGDFSLDDFKNMMQKVAQPGLMGRMMGLMPGMGQFKE
AMESEAAGGQLRQIIGAINSMTPAERKNPKLIDATRRTRIAKGAGVQSPVITQLIKQFDV
MKPMMQAMSGKGSGDRMAMMRQIQANAMSGDPRLGGLKTKQSTGKRLSPAEKAQQRKERD
KLKRKLKRKKR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgattcactctccgacggtctgcaatccgctttcaaaagtttgtctggcaaaggc
aaactgaccgaaggcaatatgcgcgatgggctcaagatcgtggagcaatcgctgctcgag
gcggacgtcagctacagcgtcgtccaggacttcatgggccatgtttccgaaaaagccctc
ggaaaacgcgttctcctgtcgctgcggccgcaagaagagctggttcgaatcgtctacgac
gagctggtggaaaccctcggccccgtcgattccgccctgaatttgaaagccgatggtccc
acgatcatcatgctgtgcgggctgcaaggcagcggaaaaacgaccacctgtggcaagctg
accaagctgctgcaagaacaaaacatcacccccttgctggtcgcggctgacttgcaacgc
cccgccgccatcgaacaactcaaggtcattgggtcgcaacttggcgtccccgttcacgct
gaaacggaccacaaagacccggtcaaggtctgtcaaaccggtgtggaaatggcccgccgc
gatggcaatcgcgtggtcatcttggacaccgcaggacgtttggcgatcgacgccgaactg
atggccgagctgaagaaaattgaccgcaaagtcgggcccgaccaggtttacttggtcgtc
gatggcatgacgggtcaagacgcagtcaacagcgctggtgcgttcaacgacgcgttggaa
ctggacggcgtcgtgatgaccaaactggacggcgacgctcgcggcggagccttgctgtcc
gtcaaacaagtcaccggcgtaccgatcaaattcatgggcacgggcgagcacttcgatgct
ctggaacccttccgccctgaaggcatggccagccgcattttgcagatgggcgacatcgtc
gccgcggctcgcgaagcacaccgaatcgtggacgaagacgaacgggaagagctggaggcc
aaaatggccagcggcgacttctcgctcgacgacttcaagaacatgatgcagaaagtcgcc
cagcctgggttgatgggacgcatgatgggcctgatgcctggcatgggccaattcaaagaa
gcgatggaatcggaagcggccggcggccaacttcgacaaattatcggggcaatcaattcg
atgacccccgcggaacgcaaaaaccctaagctgatcgatgcgactcgtcgcacgcgaatc
gcgaagggtgctggcgttcaatcgccagtcatcacgcaattgatcaaacaattcgatgtg
atgaagccgatgatgcaagcgatgtccggcaagggcagcggcgatcggatggcaatgatg
cgtcaaattcaagctaacgcaatgtcgggagacccccgcttgggtggcttgaaaacaaag
cagagcacggggaaacgactctccccagccgagaaggctcagcaacgcaaagaacgcgac
aagctgaaacgaaaactcaaacgaaaaaaacgctga
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