Rhodopirellula sp. P2: PSR62_23525
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Entry
PSR62_23525 CDS
T10699
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rhoi Rhodopirellula sp. P2
Pathway
rhoi03030
DNA replication
rhoi03410
Base excision repair
rhoi03420
Nucleotide excision repair
rhoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSR62_23525 (polA)
03410 Base excision repair
PSR62_23525 (polA)
03420 Nucleotide excision repair
PSR62_23525 (polA)
03440 Homologous recombination
PSR62_23525 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhoi03032
]
PSR62_23525 (polA)
03400 DNA repair and recombination proteins [BR:
rhoi03400
]
PSR62_23525 (polA)
Enzymes [BR:
rhoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSR62_23525 (polA)
DNA replication proteins [BR:
rhoi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PSR62_23525 (polA)
DNA repair and recombination proteins [BR:
rhoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PSR62_23525 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSR62_23525 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
PPS_PS
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WDQ16563
LinkDB
All DBs
Position
6695013..6698204
Genome browser
AA seq
1063 aa
AA seq
DB search
MAKSRPRPKQNDDDQMLFSGFDEAPAAAASTANQVAESGLEATASAPGPADKPAPAAAAE
RDPNQLSATRGFTPSPKAATVPSVAGKGVTPLPTNAAPQSRAPASSEAAPQDASHTGPRA
DRETPEERQQRHDAVRIADVDLPAVLQRPIPETTDDPVPDLTDKLVVVVDAHSLIYQVFH
ALPPMTSTGGLPVSAVYGFVGDMLELLSRKNPDFLIAAFDKSEVTFRNELYPDYKANRDS
MPDELRQQIPLIRQAIDAMGIGIIEQGGFEADDLLATVAAKVEDAGGRCLIVTSDKDCRQ
LISEQTKIYNIRKDQEIDAAELQELWGIRPDQVVDYQALVGDPVDNVPGISLIGPKIAQQ
LLEKHGTLEEILQNAKSISGKKRKENLMNGREAAMMSRELVELKRDVESPIPWNRCVRSA
ADLERVDALLQEFGFRRLRGRAAELLGGEAPVEEPPPAWESRYQTITTESELKALAQELA
KQTVLAIDTETTSTQARGCDLVGISIAWQAGEAAYIPVRAPAGDPVTEQSVAIETLREVL
ESSTIEKVGHNLKFDMIVLRSAGVQLGGVTLDTMVADYLLNSGGRNHGLDDLAKRKLNHD
NLSIKDLIGTGKKQITMDQVPVDDVSPYACEDVDVPIRVAPTLRDELTESGLDGLFDELE
MPLIDVLAEMEFNGIHVDAGTLAQMSERFEKEIADLRALVFAAAGHEFNLDSPKQLGVVL
FEELGLPVIKKTKTGVSTDADVLSQLAVNHEIAQHILQYRQATKLKNTYIDALPQLICEK
TGRVHTSFRQDVAATGRLSSSEPNLQNIPIRTEQGKAIRAAFTAGQEGWSLLGADYSQIE
LRVLAHYSGDEALISAYQDDADIHTRVAAEVNGIEESEVTSDLRRIAKTINFGIVYGQSP
FGLAKTLGISNDEARDYIELYFQRYAGVEAFMMDTLSRCRNEGYVTTMLGRRREIKGVRD
LANLPESKRRSLTEPERIAINMPIQGTAADLIKLAMLRVHEQLQQSDLQARLLLQIHDEL
LLESPDEELDALSDLIRESMTSVMELDVPLKVDVAHGRTWADC
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatctcgacctcgccccaaacagaacgacgacgaccaaatgctgttcagcggg
ttcgacgaggcccccgcagcggccgcctccaccgccaaccaagtcgccgaatccgggcta
gaagcgactgcatcggcccccggcccggccgacaaacccgcccctgctgccgccgcagag
cgtgacccgaaccaactgtccgccacccgcgggttcacccccagccccaaggccgcgacc
gttccgtccgtcgcgggcaaaggcgtgacgccgctgccgaccaacgccgccccacaatcc
cgtgcccccgcgtcctcggaagccgcaccgcaggacgcctctcacacgggcccgcgagcc
gatcgcgaaacaccggaagaacgccagcaacggcacgacgcggttcgaatcgccgacgtt
gacttgcccgctgtgctgcaacgccccatcccggaaaccaccgacgatccggtccccgac
ctgactgacaaactggtcgtcgtcgtcgacgctcactcgttgatctaccaggtcttccac
gccttgccgccgatgaccagcaccggagggctgccggtttccgccgtgtacggcttcgtc
ggcgacatgctggaactgctctcgcgcaagaaccccgacttcttgatcgccgcgttcgac
aaaagcgaggtcacattccgaaacgagctgtaccccgactacaaagccaatcgggactcg
atgcccgatgagcttcgccaacaaatccccctgatccgacaagccatcgatgcgatgggc
atcggcatcatcgaacagggcggcttcgaagccgacgatctgctggccaccgtcgctgcc
aaagtcgaagacgctggcggccgctgcctgattgtcaccagcgacaaagattgccggcaa
ctgatcagcgaacaaaccaagatctacaacatccgcaaggaccaagagatcgacgccgcc
gaactgcaagaattgtggggcatccggcccgatcaagtcgtcgactaccaagcgctcgtc
ggcgaccccgtcgacaacgttcccggcatctccctgatcggccccaagatcgcccagcaa
ttgctggaaaaacatggcaccttggaagagatcctccagaacgccaagtcgatctcggga
aagaaacgcaaagagaacctgatgaacggccgcgaggcggcgatgatgtcgcgtgaactg
gtcgaactcaaacgcgatgtcgaatcaccgatcccctggaatcgatgcgtccgctccgcc
gccgacctcgaacgcgtcgacgcgctgctacaagagttcggttttcggcgtctgcggggt
cgcgccgccgaactgctgggcggggaagcccccgtggaagaaccaccaccggcttgggaa
tcccgctaccaaaccatcaccaccgaaagcgaactgaaagccctggcccaagaactcgcc
aagcaaaccgtcctcgccatcgacacggaaacgaccagcacccaagcccggggatgcgac
ctggtgggcatctcgatcgcgtggcaagcgggcgaagccgcctacatccccgtccgcgcc
cccgccggcgatccggtgaccgagcagtccgttgcgatcgaaaccctccgcgaggttctc
gaatcctcgacgattgaaaaggtcggccacaacctgaagttcgacatgatcgtgctgcgt
tccgccggcgtgcaacttggcggggtcaccctcgacacgatggtcgccgactacctgctc
aattccggaggccgcaaccatgggctggacgacctcgccaaacgcaaactcaatcacgac
aacctctccatcaaagacctgatcgggacgggcaagaaacaaatcacgatggaccaagtc
cccgtggacgacgtttccccttatgcctgcgaagacgtcgacgtgcccattcgagttgcc
cccacgctccgcgacgaattgaccgagtccggtctggatggcttgttcgatgaactcgaa
atgccgctgatcgatgtgctcgccgagatggaattcaacggcatccatgtcgacgcgggc
acgctggcccaaatgagcgagcgctttgaaaaggaaatcgcggacctgcgggcgttggtg
tttgccgctgccggccatgagttcaatctcgacagccccaagcaactcggggtggtcctg
ttcgaagaactcggcctgccggtgatcaaaaaaaccaagaccggggtcagcaccgatgcg
gatgtgctcagccaattggcggtcaaccatgagatcgcccaacacatcctgcagtaccgc
caagcgaccaagctcaagaacacctacatcgatgccctgccgcaattgatctgcgaaaaa
accgggcgggtccacacctcgttccggcaagacgtcgcggccacgggccggctcagcagc
agcgaaccgaacctgcaaaacattcccatccgaaccgaacaaggcaaagcgatccgggcc
gccttcaccgccggccaagaaggttggtccttgctcggcgccgattactcgcaaattgaa
ctgcgtgtgctggcgcactacagcggtgacgaagccttgatcagcgcctaccaggacgac
gccgacattcacacgcgagtcgccgcggaagtcaacggcatcgaagaatcggaagtgacc
agcgacctgcggcggatcgccaagacgatcaacttcggaatcgtgtacgggcaaagtcca
tttgggttggccaagacgctcggcatcagcaacgacgaagcgcgggattacatcgagttg
tacttccaacgttatgcgggtgtcgaagcgttcatgatggacacgctgtcccgctgccgc
aacgaaggttacgtgacaaccatgttgggtcgccggcgagagatcaaaggcgttcgcgac
ctcgccaacctgcccgaatcaaaacgccgcagcctcacggaaccggaacgcattgcgatc
aacatgccgattcaaggcaccgcggcggatctgatcaaactcgccatgctgcgagtccac
gagcaattgcaacagagcgacctgcaagcacgtctgctgctgcagatccacgatgagctg
ttgctcgaatcccccgacgaagaactggatgccttgtccgacctgattcgcgaatcgatg
accagcgtgatggaactggacgtgcccctgaaagtcgacgtcgcccacggccgaacctgg
gccgattgttag
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