Rhodopirellula sp. P2: PSR62_23850
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Entry
PSR62_23850 CDS
T10699
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rhoi Rhodopirellula sp. P2
Pathway
rhoi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rhoi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PSR62_23850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhoi03021
]
PSR62_23850
03400 DNA repair and recombination proteins [BR:
rhoi03400
]
PSR62_23850
Enzymes [BR:
rhoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PSR62_23850
Transcription machinery [BR:
rhoi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PSR62_23850
DNA repair and recombination proteins [BR:
rhoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PSR62_23850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
WDQ16624
LinkDB
All DBs
Position
complement(6804814..6805809)
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AA seq
331 aa
AA seq
DB search
MTMHIRWRGMELPSSLEVDRDSLTQTYGKFSAEPFERGFGASIGNSMRRVLLSSLVGSAV
TQIKIRGAQHEFTSIPGVLEDVTDIVLNVKSLIVSSNTDSTRVITVERNTAGVVTGADVQ
TDADVEVINKDHVICTLTDDVPFMMEMVVETGRGYVPSTEHSSVDHEIGIIPIDAVFSPI
VRVRYEVEATRVGQKTNYDRLILEIWTDGTINPEMALTEAAKILRKHLNPFVQYRELGPS
IFSAARGGAGSPEAQLEAKLNMTLADLRLSVRANNCLESENIMTVRDLVQRTEDSLLEVR
NFGDTTLNEVREKLSQYGLHLGMRVPNQPLF
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgcacatccgctggcgcggaatggaactgcccagttcgctcgaagtcgatcgt
gactcgctgacccaaacctacggcaagttttctgccgagccatttgagcgtggttttggt
gccagcattggcaacagcatgcgtcgcgtgctgctgagcagtttggtgggcagtgccgtc
acccaaatcaaaatccgtggtgctcaacacgagttcacatcgattccaggtgttcttgaa
gatgtcaccgacatcgtcctgaatgtcaaatcgttgatcgtgagcagcaacaccgattcg
actcgagtgatcaccgtcgaacgcaacaccgctggtgttgtcaccggtgctgacgttcag
accgacgcggacgttgaagtcatcaacaaagatcacgtcatctgcacgttgaccgacgac
gttccattcatgatggaaatggttgttgaaaccggtcgcggttatgttcctagcacggaa
cacagcagcgtggatcacgagatcggaatcatcccgatcgacgcggtcttcagccccatc
gttcgtgttcgttacgaagtggaagcgacacgtgtcggtcagaagaccaactacgatcgt
ttgatcctcgaaatttggactgacggaacaatcaacccagagatggcgttgaccgaagcc
gccaagatccttcgcaaacacctcaacccgttcgtgcaataccgcgaattgggaccaagc
attttctccgccgctcgcggtggagctggttcgcctgaagctcagctggaagcgaagttg
aacatgactctcgccgacctgcgtttgtcggtgcgagccaacaactgcttggaaagcgaa
aacatcatgactgttcgcgaccttgtgcagcgaaccgaagattcattgttggaagttcgc
aattttggcgacacaactctcaacgaagttcgtgaaaagctttcgcagtatgggttgcac
ctcggcatgcgtgtgccgaatcagcctctgttttaa
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