Rhodopirellula sp. P2: PSR62_24395
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Entry
PSR62_24395 CDS
T10699
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhoi Rhodopirellula sp. P2
Pathway
rhoi03420
Nucleotide excision repair
rhoi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSR62_24395
03430 Mismatch repair
PSR62_24395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoi03400
]
PSR62_24395
Enzymes [BR:
rhoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSR62_24395
DNA repair and recombination proteins [BR:
rhoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSR62_24395
MMR (mismatch excision repair)
Other MMR factors
PSR62_24395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WDQ16731
LinkDB
All DBs
Position
6950864..6953227
Genome browser
AA seq
787 aa
AA seq
DB search
MDAITKDLTVAQAEAVQHIDGPLLIIAGPGSGKTRVVTHRIAHMLQSGIRPWQIAALTFT
NKAADEMRSRVNLLAPDQPVWMGTFHRFCAQQLRRYAPMVGLAENYSIYDSSDSKSAMKR
AITAAGVSTSHTSPEQISSAISNAKNRLITPEIMAQQTGRAGDTVAAKVYPVYQQQLLTA
NAVDFDDLLFHFARLLRENPEVRSNLDEKLKYIMVDEYQDTNLAQYAIVRALSVDHPNLA
VTGDPDQSVYGWRGADLNNILDFEKDYPSVKTVRLEQNYRSTPEILRVADQLIRHNRRRK
QKKLFTDNPTGEAVTLRQYEDGYKEADGIADEIANQMIAGNAEPRDFAIMCRMNALTRSI
EHALRNRGIPYQIVNGLEFYQRKEIKDLLAYLHLINNPRHDVALHRVINTPTRGIGAKTL
ERIQRFADEHRIPMLEATRRVDEIDSLSKRAKTLVTSFVRLYDRLSVKATATLEDLLRFL
IEEIKFVAYLERTTPEQQDNNPIANVDEFISAAVEFDQMHPEDGSLEAFLEQVALVSDTD
AFEDSNNRVTLMTMHAAKGLEFPRVFIIAVEDNLLPHRRSKEDETQLEEERRLLFVGVTR
AEQWLQISYAKLRSFRGENQPAIPSMFLGELPRDEMQVVEVKGSRNFFDDAYDDEYPDSW
DLVQEPAAVTDTGPAGQTEVADGPRIIPMTDQSAIPDVYHDDAPPTKKKKPKVSIQAELK
TASDLLQSGATPLGAYREGSTVRHNEYGEGTIIALTGKGPKRTAKIKFEETEETFRLAFA
KIELLER
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcacaaaagatttgaccgtcgcgcaagccgaagcggtccagcacatcgac
ggacctctgctcatcatcgccggtcccggcagcggtaaaactcgcgtcgtcacccaccgc
attgcgcacatgctgcaaagcggaatccgtccgtggcagatcgcggcgttgacgttcacc
aacaaagccgccgatgagatgcgatcgcgagtcaatctgctcgcccccgaccaacccgtt
tggatgggcacgtttcaccggttctgcgctcagcaacttcggcgttacgcaccgatggtg
gggttggccgagaactactcgatctacgattcttcggattcgaaatccgcgatgaagcgg
gccatcacggcggccggtgtgtcgaccagccacacctcgcccgagcaaatttcttcggcc
atttccaacgccaagaaccgcctgatcactcccgaaatcatggctcaacaaaccggccgc
gccggcgacaccgtcgcagcgaaggtctacccggtttaccaacaacaattgctgaccgcc
aacgcggtcgacttcgatgacctgctctttcacttcgctcggttgctgcgggaaaacccc
gaggtccgatcgaacctggacgagaagctcaagtacatcatggtcgacgagtaccaagac
acgaacttggctcagtacgcaattgtccgcgcgctgtccgtggatcatccgaacttggcc
gtcaccggtgaccccgaccaatcggtgtatggctggcgtggcgccgacctcaacaacatc
ctggattttgaaaaggattatccgagcgtcaaaacggttcgcttggaacaaaactaccgc
agcacgccggagattctgcgtgtcgccgatcaactgattcggcacaaccgccgtcgcaaa
cagaagaaactgttcaccgacaacccgaccggtgaagcggtcacactgcgacagtacgag
gacggttacaaagaagccgacgggatcgccgatgaaatcgccaaccaaatgatcgcgggc
aatgccgaaccgcgagattttgcgatcatgtgccggatgaacgcactgacgcgatccatc
gaacacgccctgcgaaatcgcggcatcccgtaccagatcgtcaacgggctggagttctac
caacgcaaagagatcaaggatctgctggcgtatttgcacctgatcaacaaccctcgccac
gacgtggctctgcatcgcgtgatcaacacaccgacgcgaggcatcggtgccaagacgctc
gaacgaatccaacgctttgccgatgagcaccgcatcccgatgctggaagcgactcggcga
gtcgacgaaattgattcgctctccaaacgcgccaaaacgctggtgacgtcgttcgtccgt
ctctacgatcgactgtccgtcaaagccaccgcgacgctggaggatctgctgcggttcctg
atcgaagagatcaaattcgttgcttacctggaacggacaacgccagaacaacaggacaac
aacccgatcgccaacgtcgacgaattcatctccgccgccgttgaatttgatcagatgcac
ccggaagacggatcgctggaagcgttcttggaacaagtcgcattggtctcggacaccgac
gcgttcgaagattccaacaaccgtgtgaccctgatgaccatgcacgccgccaaaggcctg
gaattccctcgcgtgttcatcatcgcagtcgaggacaacctgctgccgcaccgccgcagc
aaagaagacgagacccaactcgaagaggaacgtcgcctgctgttcgtgggcgtgacgcga
gccgaacaatggctgcagatcagctatgcgaagctgcgaagttttcggggcgaaaaccaa
ccggcgatccccagcatgttcctgggcgaactgcctcgcgatgaaatgcaggtggtcgaa
gtcaaaggcagccgcaacttctttgacgacgcctacgacgatgaataccccgactcatgg
gacctggttcaagaacccgctgcggtcaccgacaccggccccgcgggacaaacggaagtc
gccgatggacctcgcatcatcccgatgacagatcaatccgcgatcccggacgtgtatcac
gacgacgccccgccaaccaagaagaaaaagcccaaggtttcaatccaagccgaactgaaa
acggccagcgatctactgcaatccggggcaacacccttgggtgcgtaccgcgaaggcagc
acggttcgccacaacgaatatggcgagggaacgatcatcgccctgacaggcaaaggcccc
aaacgaaccgccaaaatcaagttcgaagaaaccgaagaaacctttcgtctggcatttgcc
aagatcgaattgctggagcgctga
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