Rhodococcus sp. JVH1: JVH1_00475
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Entry
JVH1_00475 CDS
T10360
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rhoj Rhodococcus sp. JVH1
Pathway
rhoj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
JVH1_00475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoj03400
]
JVH1_00475
DNA repair and recombination proteins [BR:
rhoj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
JVH1_00475
BRITE hierarchy
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Paralog
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Motif
Pfam:
Ku
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
XEM86879
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All DBs
Position
1:98564..99460
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AA seq
298 aa
AA seq
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MERMRSIWKGSIAFGLVNVPVKVYSATEDHDIRFHQVHAKDGGRIKYNRVCSECGNVVQY
ADIDKAYDSDDGVRVVLTDDDFGKLPAAEKHEIPVLQFVPTEQIDPILFEKSYFLEPDSS
SPKAYVLLATALENSDRTALVHFTLRQRTRLAAMRSRDGVLVIQTLLWPDEVRVAEFSSL
DGVDKPKAKELAMAETLVDSMADDFDPTEFTDDYQVQLRELLDEMIESGGKKVIPVAEVE
KSGEDAEVVDLVAALQRSVDAAGKKAAPAKKKPAKKAPAKTAAKKATAKSSSSERKRA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcatgcggtcgatatggaagggctcgatagcgttcggactcgtgaatgtgccg
gtcaaggtctattcggcaaccgaggatcacgacatcaggttccaccaggtccatgccaag
gacggcggccggatcaaatacaaccgcgtctgctccgaatgcggcaacgtcgtccaatac
gccgatatcgacaaggcctacgactccgacgacggcgtgcgcgtggtgttgacggacgat
gatttcgggaaactgcctgccgccgagaaacacgagattcccgttctgcagttcgtgccg
accgaacagatcgatcccattctgttcgagaagagttacttcctcgaaccggattccagc
tctccgaaggcgtatgtccttctcgcgactgccctcgagaacagcgaccgcacagccctc
gtccacttcaccctccggcagcgcacccgactggccgcgatgcggtcacgcgacggggtg
ctggtgatccagacgctgctgtggccggacgaggtacgcgtcgccgagttctcctcgctc
gacggcgtcgacaagccgaaggcgaaggaactcgcgatggccgagacactcgtcgacagc
atggccgacgacttcgaccccaccgaattcaccgacgactaccaggtgcagttgcgagaa
ctgctcgacgagatgatcgagtcgggcggcaagaaggtcatccccgtcgccgaggtcgag
aagagcggcgaggacgccgaagtggtggatctggtggcggccctgcagcgcagcgtcgac
gccgccgggaagaaggccgcaccggccaagaagaagccggcgaagaaagctccggccaag
acggcggcgaagaaggccacagcgaaatcatccagttcggaacgcaagcgcgcctga
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