Rhodococcus sp. JVH1: JVH1_00690
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Entry
JVH1_00690 CDS
T10360
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rhoj Rhodococcus sp. JVH1
Pathway
rhoj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JVH1_00690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoj03400
]
JVH1_00690
Enzymes [BR:
rhoj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JVH1_00690
DNA repair and recombination proteins [BR:
rhoj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JVH1_00690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
XEM86919
LinkDB
All DBs
Position
1:complement(145617..147635)
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AA seq
672 aa
AA seq
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MSAEKVAAEVDPVARVLPLLPLAHLDREFDYLVPQDLDEQARPGVRVRIRFAGRLVDGFV
VSRNATSDHQGRFGWLERVISPERVLTEEITRVVDLVAGRYAGTRADVLRLAIPPRHARA
ESEAASEPPEVPDSAIETEAWDRYVHGGAFLTALSGERAPRAVWQALPGEDWPARLAELS
GLVAATGASTVVVVPDQRDLDRVVAAVENLLGKDAVVGLAAGLGPALRYRRWLAALRGTA
KVVVGTRSSVFAPTPRTGLIVVWDDGDDNHSEPRAPYPHAREVALLRAYASGCAVVLAGH
ARTAEAQALVDSGWAHDLVASRDSVRAAAPKITALADSDHALARDPGARAARLPAIAFAA
AREALGAGRGVLVQVPRRGYVPSLACGKCRAPARCRRCNGPLALPSAAGPDGAGTPACRW
CGVADAAHRCHACGAKALRAVVVGAGRTAEELGRAFPGVAVRMSGGTDVVDEVKQGPTLV
VSTVGAEPVMPGGYGAALLLDGWALLGRPDLRAAEETLRRWMTASSLVRPFAEGGQVVVV
ADSGIPTVQALVRWDPVGHARAQYEERAEVGFPPAIHLAAIDGSAKAIADLLDLADLPAN
AELLGPVELPAGERLPFSGDAPEPADVERMLIRVPRGEGKPLAKALGEAQSVRSARKDSQ
PARVQIDPIRIG
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcggaaaaggttgcggcagaagtcgatccggttgcccgggtgctgccgctgctt
ccgcttgcccacctcgaccgcgaattcgactacctcgttccgcaggacctcgacgagcag
gcgcggcccggggtccgggtgcgcatccggttcgccgggcgtctggtcgacgggttcgtc
gtctcccggaacgcgacgagcgaccatcagggccgtttcggctggctcgaacgggtgatc
tcgcccgagcgggtcctgaccgaggagatcacccgggtggtcgacctcgtcgccggccga
tacgccggaacccgcgcggacgtcctgcggctcgcgatcccgccgaggcacgcgcgggcg
gagtccgaggcggcgtccgaaccccccgaggtgccggacagcgcgatcgagaccgaggcg
tgggaccggtacgtgcacggcggcgcattcctgaccgcactgtcgggggagcgtgccccg
cgcgcggtctggcaggcgctccccggcgaggactggcctgcgcgtctcgcggaactgtcg
gggctcgtcgccgccaccggggcgagcaccgtcgtcgtcgttcccgatcagcgtgatctc
gaccgtgtggtcgcggcggtggaaaacctcctgggcaaggacgcggtcgtcggactcgcc
gccggtctcggtccggcgctgcggtaccggcgttggctggcggcgctgcgcgggacggcc
aaggtcgtcgtcgggacccggagttcggtgttcgcgccgacgccgcgcaccgggctgatc
gtggtctgggacgacggggacgacaaccattccgagccgcgcgcaccctatccgcacgcc
cgcgaggtggcgctgctccgcgcgtacgccagtggttgcgcggtggtgctggccggtcac
gcgcgcaccgcggaggcgcaggccctggtcgactcggggtgggcgcacgacctcgtggcc
tcccgggactcggtgcgggcggccgccccgaagatcaccgcactcgcggacagtgaccac
gccctggcccgcgatcccggtgcgcgcgcggcccggttgcccgcgatcgcgttcgcggct
gcccgggaggcgctcggcgccggccggggagtgctggtccaggtgccccggcgcggctac
gtgcccagcctcgcgtgcggcaaatgccgggcgcccgcgcgatgccgacgatgcaacgga
cctctcgcgctgccgtccgcggccggcccggacggggcggggacgcccgcgtgccgatgg
tgtggcgtcgccgacgccgcacaccgctgccacgcgtgcggagcgaaggcgctgcgggcc
gtcgtggtcggtgccggacggaccgccgaggaactgggtcgcgcgtttcccggggttgcc
gtccggatgtcggggggcacggacgtcgtggacgaggtgaagcagggtcccaccctcgtg
gtgtcgacggttggggccgaaccggtgatgccgggcggctacggcgcggcgttgctgctc
gacggctgggcgctgctgggccgtcccgacctgcgcgccgcggaggagacgctgcgccgg
tggatgacggcgtcgtcgctcgtgcggccgttcgccgagggcggtcaggtggtcgtggtc
gccgattcggggattccgaccgtgcaggcgctggttcgctgggatccggtcggtcatgcc
cgtgcgcagtacgaggagcgggccgaagtcggatttccgcccgccatccacctcgcggcg
atcgacggcagtgcgaaggcgatcgccgatctcctggacctcgccgacctgccggcgaat
gcggaattgctcggcccggtcgagttgcctgcgggggagcggctgccgttctccggcgac
gcgcccgagcccgcggacgtggagcgcatgctgatccgggtgccgcggggcgaggggaag
cctctggccaaagcgctgggagaggcgcagtcggtgcgcagtgcgcgcaaggactcgcag
cctgcccgcgtccagatcgaccccattcgcatcggctag
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