Rhodococcus sp. JVH1: JVH1_03115
Help
Entry
JVH1_03115 CDS
T10360
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rhoj Rhodococcus sp. JVH1
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhoj03016
]
JVH1_03115 (truB)
Enzymes [BR:
rhoj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JVH1_03115 (truB)
Transfer RNA biogenesis [BR:
rhoj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JVH1_03115 (truB)
Prokaryotic type
JVH1_03115 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
LPP
Motif
Other DBs
NCBI-ProteinID:
XEM87334
LinkDB
All DBs
Position
1:complement(661982..662899)
Genome browser
AA seq
305 aa
AA seq
DB search
MSAREKPSSGLVGAGLLIVDKDAGVTSHDVVARCRKLLGTRKVGHAGTLDPMATGVLVLG
VERATKLLGLLALTTKAYTATIRLGQATTTDDAEGEVVASADASGVTDEEIAAQVHTLTG
DIQQIPSSVSAIKVDGRRAHALIRAGEEFELAPRSVTVSRFEVVARRTEGAFVDLDVEVE
CSSGTYVRALARDLGIALIGVGGHLTSLRRTRVGPFTLEHARTLEQLAEEPGVSLDIDAA
AQTAFPHRQVDADEAESISQGRWLEPIGIKGVYAAIDPSGHTIALLQERGRRASSVMVVR
PATLR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgcacgtgaaaagccctcttccggtctcgtcggcgccggactgctcatcgtcgac
aaggatgcgggcgtcaccagccacgacgtggtggcccggtgccgcaagctgctcggcact
cggaaggtcgggcatgcgggcactctcgacccgatggccaccggggtgctggtgctcggt
gtggagcgggcgacgaagctgctggggctcctcgcgttgaccaccaaggcgtacacggcc
acgatccggctgggtcaggccaccacgaccgacgacgccgagggcgaggtcgtggcgtcg
gccgatgcgtccggcgtgacggacgaggagatcgccgcgcaggtgcacaccctcaccgga
gacatccagcagatcccgtcgagcgtcagcgccatcaaggtggacggcaggcgggcgcat
gcactcatccgtgcgggcgaggagttcgaactcgctccccgttcggtcacggtgtcccgg
ttcgaggtcgtcgcgaggcgaaccgagggcgcgttcgtcgacctcgacgtcgaggtggaa
tgttcctccggcacgtacgtccgggcgctcgcgcgtgatctggggatcgcgctgatcggc
gtcggcgggcatctcacctcgctgcgacggacccgggtgggaccgttcacgctcgagcac
gcgcgcacgctggaacagctcgccgaggagccgggggtcagcctcgacatcgacgccgcc
gcgcagaccgcgttcccgcaccggcaggtcgacgcggacgaggccgaatcgatcagtcag
ggccggtggctcgagccgatcggaatcaagggcgtctacgccgccatcgatccgagcggg
cacacgatcgcgctgctccaggaacgtggacggcgggccagttcggtgatggtggtccgc
cccgcgaccctgaggtag
DBGET
integrated database retrieval system
