Rhodococcus sp. JVH1: JVH1_03625
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Entry
JVH1_03625 CDS
T10360
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rhoj Rhodococcus sp. JVH1
Pathway
rhoj02024
Quorum sensing
rhoj03060
Protein export
rhoj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
JVH1_03625 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JVH1_03625 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JVH1_03625 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rhoj02044
]
JVH1_03625 (ffh)
Enzymes [BR:
rhoj01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
JVH1_03625 (ffh)
Secretion system [BR:
rhoj02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
JVH1_03625 (ffh)
Eukaryotic Sec-SRP protein
JVH1_03625 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
nSTAND3
APS_kinase
AAA_22
TctA
ArsA_ATPase
AAA_16
Zeta_toxin
AAA_31
AAA_18
NPHP3_N
MeaB
AAA_24
AAA_33
NTPase_1
MobB
CLP1_P
Thymidylate_kin
NACHT
ATP_bind_1
TsaE
6PF2K
AAA_30
Motif
Other DBs
NCBI-ProteinID:
XEM87424
LinkDB
All DBs
Position
1:complement(762841..764427)
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AA seq
528 aa
AA seq
DB search
MFESLSDRLTGALKDLRGKGRLSGADIDATCREIRLALLEADVALPVVRSFIAKIKERAK
GVEVSAALNPAQQVVKIVNEELVEILGGETRRLAFAKTPPTVIMLAGLQGSGKTTLAGKL
AKWLRDQGHTPLLVACDLQRPGAVTQLQIVGERAGATVFAPHPGTSIGGGDNELGVTAAD
PVEVARAGVEEARNKQFDVVIVDTAGRLGIDADLMAQAAGIRDAVNPDETIFVLDAMIGQ
DAVSTAEAFREGVGFTGVVLTKLDGDARGGAALSVREVTGQPILFASTGEKLEDFDVFHP
DRMASRILGMGDVLSLIEAAEQHFDAEQAEATAQKIGSGQLTLEDFLEQMMAVRKMGPIG
NLLGMLPGAGQMKDALANVDEKQLDRVQAIIRGMTPAERDDPKIINASRRLRIANGSGVK
VSDVNQLVDRFFEARKMMAAMAGRMGMPGSRKPQRSKKGKKGKKGGKGPTPPKVRGGFPG
GLPGGFPGMPPGGLPAGMPDLSNMPKGLDELPPGLEGIDLSQLKLPKK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgaatccctttccgacaggttgaccggagccctcaaggatctgcgtggcaagggt
cgcctttccggagccgacatcgatgccacctgccgtgagatccggttggccctgctcgag
gcagacgtcgcgctgcccgtcgtccgctcgttcatcgccaagatcaaggaacgcgccaag
ggcgtcgaggtctcggcggcgctgaacccggcgcagcaggtcgtcaagatcgtcaacgag
gaactcgtcgagatcctcggtggcgagacccgccggctggcgttcgccaagacgccgccg
acggtcatcatgctcgccggtctccaaggttccggtaagacgaccctcgcaggcaagctc
gcgaagtggctgcgcgaccagggacacacgccgctgctcgtggcctgtgacctgcagcgt
cccggcgccgtcacccagctgcagatcgtcggcgagcgcgcgggagccacggtgttcgca
ccgcaccccggcacatccatcggcggcggcgacaacgagctgggcgtcaccgcggccgac
ccggtcgaggtggcccgggcaggtgtggaggaagcccgcaacaagcagttcgacgtggtg
atcgtcgacaccgcgggccggctgggtatcgacgccgacctgatggcgcaggcggcgggt
atccgcgacgccgtgaacccggacgagacgatcttcgtcctcgacgcgatgatcggtcag
gacgcggtcagcaccgccgaggccttccgtgagggtgtcggattcaccggtgtcgtgctc
acgaagctcgacggtgacgcccgcggtggtgcggcgctcagcgtccgcgaggtcaccggg
cagcccatcctgttcgcgtccacgggtgagaagctcgaggacttcgacgtcttccacccc
gaccgcatggccagccgcattctcggcatgggtgacgtcctcagcctgatcgaggcggcc
gagcagcacttcgacgccgagcaggccgaagccacagcccagaagatcggttcgggacag
ctcacgctggaggacttcctcgagcagatgatggctgttcgcaagatgggccccatcggc
aacctcctgggcatgctcccgggtgcggggcagatgaaggacgcgctcgcgaacgtcgac
gagaagcagctcgaccgggtgcaggccatcatccgcggcatgacccccgccgagcgtgac
gatcccaagatcatcaacgcgtcccgcaggctgcggatcgccaacggttcgggtgtcaag
gtctccgacgtcaaccagctcgtcgaccgtttcttcgaggcccgcaagatgatggccgcg
atggccggtcgtatgggcatgcccggttcgcggaagccgcagcgcagcaagaagggcaag
aagggcaagaagggcggcaaggggccgacgccgccgaaggtgcgcggcggattccccggc
ggcctgcccggcgggttcccgggtatgccgcccggaggtctccccgcggggatgcccgac
ctgtcgaacatgccgaagggcctcgacgaattgccgcccggactcgagggcatcgacctg
tcccagctgaagctgccgaagaagtag
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