Rhodococcus sp. JVH1: JVH1_03650
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Entry
JVH1_03650 CDS
T10360
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
rhoj Rhodococcus sp. JVH1
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rhoj03036
]
JVH1_03650 (smc)
Chromosome and associated proteins [BR:
rhoj03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
JVH1_03650 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
XEM87429
LinkDB
All DBs
Position
1:complement(770443..774048)
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AA seq
1201 aa
AA seq
DB search
MHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKALRGGK
MEDVIFAGTAGRAPLGRAEVTLTIDNSDGALPIDYSEVSITRRMFRDGAGEYEINGSSCR
LMDVQELLSDSGIGREMHVIVGQGRLAAILESRPEDRRAFIEEAAGVLKHRKRKEKAVRK
LDAMQANLARLNDLTAELRRQLKPLGRQAEVARRAQTVQADLRDAKLRLAADDLVTRREE
LADQAQDEKVAREQHDQVTEALDEANLELGRHEQELSRLTPGAEAAAQTWFQLSALAERV
NATIRIARERARHLDSEPSANRGQDPDEMEARADRIAAEEMELVEAVEMARAALDAAKEQ
LALGEETAAEAERAHMAAVRAIADRREGLARLSGQVDTLRTRADSVDAEVSRLTVAIEEA
RQRGDAAQSEFEVVQDEIGDLDAGELGLDSHHERAVEALRLITERVTELQAEERAAGQEV
ASLRARIDALSMGLERKDGAGWLVENRAQHGIRGPIGGLITVEKGYEGAVAAAMGPAADA
VVAESLDAARSAVGALKETDSGRASLFIGSDHVARDGGHLDSGARWAVDVIDCPAELRTG
LAALLGGVVVVDSLDDAVETVRRRPDVRAVTRDGDLLGAGWMSGGSDRQPSTLEVQAAID
NSVQDLARAERRAEELSAALSGAVAEQADRQENTEQALAALNESDAAMSAIYERLGRLGQ
AARAARAESDRLMAQRDKAESGREDTLTALAELEERLRLAEQDGSSSGADTGGSDTTSID
REMAAAALAEVRAVEVEARLSVRTAEERAESVRGKADSLRRAAQVERDARARAERAMKAR
QNAAAVAAAVAESGQRVAEHLGDVVDAAMAHRDELARARTERTTQLEQVKERVRQLSGQL
ASLTDAVHRDEVARAQAALRIEQLEEAILEQHGIGLDDLIAEYGPDVALPPSALEMEEYE
QAKERGEQVTMPAPIPYDRATQERRAKRAEKDLATLGKVNPLALEEFAALEERYNFLSTQ
LEDVKTARKDLLGVVADVDARILQVFTEAYSDVEREFVQVFAKLFPGGEGRLVLTDPSDM
LTTGIEVEARPPGKKVKRLSLLSGGEKSLTAVAMLVAIFRARPSPFYVMDEVEAALDDTN
LRRLIGLFEQLREKSQLIVITHQKPTMEVADALYGVSMRGDGITTVISQRLRGQDMAAAD
A
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgaagagtctgacgctgaagggattcaaatcctttgcgtccgcaacgactctg
cgattcgagccgggaatcacctgtgtcgtaggacccaacgggtcgggtaaatccaacgtc
gtcgacgctctcacctgggtgatgggggagcagggagcgaaggccctgcgcggcggcaag
atggaagacgtcatcttcgcaggcaccgccgggcgggcgcccctcggacgcgccgaggtc
acgctgaccatcgacaactccgacggcgccctgccgatcgactactccgaggtgtcgatc
acccggcgcatgttccgcgacggcgccggagaatacgagatcaacggcagctcctgccgg
ctgatggacgtgcaggaactgctcagcgactccggcatcggccgggagatgcacgtgatc
gtcggtcagggccgcctcgccgccatcctcgaatcccgtccggaggatcggcgcgcattc
atcgaggaagcagccggcgttctcaagcaccgcaagcgcaaggaaaaggcggttcgcaaa
ctcgacgccatgcaggccaacctggcgcgcctgaacgacctcacggcggaactgcggcgc
cagctcaaaccgctcggccggcaggccgaggtggcgcgccgcgcccagacggtgcaggcc
gacctccgcgacgcgaagctgcggctcgccgcggacgacctggtcacgcgccgtgaggag
ctggccgaccaggctcaggacgagaaggtggcgcgcgagcagcacgaccaggtcaccgag
gcgctcgacgaggccaatctggagctgggacggcacgaacaggaactgtcgagactcaca
ccgggtgcggaagcggccgcgcagacgtggttccagctgtcggcactcgcggagcgcgtc
aatgcgaccattcgcatcgcccgcgaacgggcgcgccacctcgactccgagccctccgcg
aaccgcggtcaggatccggacgagatggaggcccgcgccgaccggatcgccgcggaggag
atggagctcgtcgaagccgtcgagatggcgcgcgcggcgctggacgccgccaaggagcag
ctggcactgggggaggagaccgccgccgaggcggaacgcgctcacatggcggcggtccgg
gcgatcgccgaccgccgagaaggcctggcccggttgtccgggcaggtcgacacgctgcgc
acccgcgccgactccgtcgacgccgaagtgtcccggctgaccgtcgcaatcgaagaggcc
cggcagcgcggcgacgcggcacagtccgaattcgaggtcgtccaggacgagatcggtgac
ctcgacgccggcgagctggggctggattcccaccacgagcgtgccgtcgaggcactgcgc
ctgatcaccgaacgcgtcacggaactccaggccgaggagcgcgccgccggacaggaagtg
gcatccctgcgtgcccggatcgacgcgctgtcgatgggcctcgaacgcaaggacggcgcc
ggctggctcgtcgagaatcgggcgcagcacggcatccggggaccgatcggtggactcatc
acagtcgagaaggggtacgagggtgccgtcgccgcggcgatgggccccgccgcggacgcc
gtcgtcgccgaatccctcgacgccgcccgcagcgcagtcggtgcgctgaaggaaacggac
agcggacgggcgtccctgttcatcggctccgatcacgtcgcacgtgacggcgggcacctg
gactccggcgcccggtgggccgtcgacgtcatcgactgccccgccgaactgcggaccggg
ctcgcagcgctcctgggcggggtggtcgtggtcgattccctcgacgacgccgtcgagacc
gtccggcgcaggcccgacgtgcgcgccgtcacccgagacggagatctcctcggagcgggc
tggatgagcggcggctcggaccgtcagccgagcaccctcgaggtccaggccgccatcgac
aactcggtgcaggatctggcccgcgccgaacgtcgcgccgaggaactgtccgcggcactg
tccggcgcggtcgcggaacaggccgaccgtcaggagaacaccgagcaggcactggccgcg
ctgaacgagtccgacgccgcgatgtccgccatctacgagcgcctcggccgcctcggccag
gccgcgcgggccgcgcgcgccgaatccgatcggctcatggcgcagcgggacaaggccgag
agcggtcgggaggacacgctgaccgcgctcgccgaactcgaggaacggctgcgcctggcg
gaacaggacgggtcgtcctccggtgccgacacgggtggatccgacacgacgagcatcgat
cgtgagatggcggccgcggcgctggccgaagtgcgggccgtggaggtggaagcccgactg
tcggtgcggacggccgaggagcgcgccgaatcggtgcgcggcaaggcggattccctgcgc
cgcgccgcacaggtggaacgcgacgcgcgcgcccgggccgaacgtgcgatgaaggcgcgc
cagaacgcggccgcggtcgcggcggcggtcgccgagtccgggcagcgggtggccgagcac
ctcggtgacgtcgtcgacgccgcgatggctcaccgcgacgaactcgcgcgggcccgcacc
gagcggaccacccaactcgaacaggtgaaggaaagggtgcgtcagctgagcggacagctg
gcgtcgctcaccgacgccgtgcaccgcgacgaggtggctcgcgcccaggccgcgctgcgc
atcgagcagctcgaggaggcgatcctcgaacagcacggcatcggtctggacgacctgatc
gccgaatacggccccgacgtagcgctgccgccgtccgcactcgagatggaggagtacgag
caggcgaaggagcgcggcgagcaggtcacgatgcccgcaccgattccgtacgaccgcgcc
acgcaggagcgtcgcgcgaaacgtgccgagaaggacctggcgacgctcggcaaggtcaac
ccgctggcactcgaggagttcgccgcgctcgaggagcgctacaacttcctctcgacacag
ctcgaggacgtgaagaccgcccgcaaggatctcctcggggtggtggccgacgtcgatgcc
cgcatcctgcaggtgttcaccgaggcctactcggacgtcgaacgcgaattcgtgcaggtg
ttcgcgaaactgttccccggcggtgaaggcaggttggtgctcaccgacccgtcggacatg
ctgaccaccggcatcgaggtggaggcccggccgcccggcaagaaggtcaaacggctgtcg
ctgctgtccggtggcgagaagtcgctgacggcggtggcgatgctcgtggcgatcttccga
gccaggccgtcccccttctacgtgatggacgaggtggaggccgcgctggacgacacgaac
ctgcgtcgtctgatcgggttgttcgagcagttgcgggagaagtcgcagctgatcgtcatc
acccaccagaagccgacgatggaggtcgccgacgcgctctacggcgtcagcatgcgcggc
gacggcatcaccaccgtcatctcccagcggctccgtggccaggacatggcggccgcggac
gcctga
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