Rhodococcus sp. JVH1: JVH1_03675
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Entry
JVH1_03675 CDS
T10360
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rhoj Rhodococcus sp. JVH1
Pathway
rhoj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JVH1_03675 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoj03400
]
JVH1_03675 (mutM)
Enzymes [BR:
rhoj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
JVH1_03675 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JVH1_03675 (mutM)
DNA repair and recombination proteins [BR:
rhoj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JVH1_03675 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
TackOD1
NFACT_N
Anti-TRAP
Zn_ribbon_IS1595
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
XEM87433
LinkDB
All DBs
Position
1:complement(776509..777387)
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AA seq
292 aa
AA seq
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MPELPEVEVVRRGLERHIVGASIDSVDILHPRAIRRHLPGAADLAGQLTGERIASADRRG
KYLWLVLEPSTVALVVHLGMSGQMLVQPPELPTEKHLRIRARLDSGLDLRFVDQRTFGGW
ALAPLVDVDGSLIPDSVAHIARDPLDPRFDLAATVKVVRGKHTEVKRALLDQTVVSGIGN
IYADEALWRARIHGNRLTDRLSGPKVREVLTAAQEVMREALTQGGTSFDALYVNVNGESG
YFDRSLSAYGQEDRPCPRCGTAIRREKFMNRSSFSCPKCQPAPRRSLAKSSV
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaactacccgaagtcgaggtggtccggcgcggactcgaacgccacatcgtgggg
gcgtcgatcgattccgtcgacatcctgcacccacgggcgatcaggcgtcatctgcccggc
gccgccgacctcgccggacagctcaccggcgaacgcatcgcgagcgccgaccgtcgtgga
aagtatctgtggctggtcctcgaacccagcacggtcgctctcgtggtgcatctcggcatg
agtggtcaaatgctcgtgcagccaccggaattgccgaccgagaagcatctgcggatccgg
gcccggctcgattccggtctcgacctccggttcgtcgaccagcggacgttcgggggctgg
gcgctggcgccgctcgtcgacgtcgacggctcgctcatcccggactcggtggcgcacatc
gcccgcgacccactggatccgcgtttcgacctcgcggccaccgtgaaggtcgtgcgcggc
aagcacaccgaggtcaaacgtgcgcttctggaccagaccgtcgtctccggcatcggcaac
atctatgcggacgaggcgctgtggcgcgcacggatccacggaaatcggctcaccgacagg
ctgagtggtcccaaggtccgggaagtgctcacggccgcgcaggaggtcatgcgtgaggca
ctcacccagggcggcacgtccttcgacgcgctctacgtgaacgtcaacggcgagtcgggc
tatttcgaccgttcgctgtccgcctacggtcaggaggatcgcccgtgcccgcggtgcggc
accgcgatcaggcgagagaaattcatgaaccgctcgtcgttcagttgcccgaagtgccag
ccggcaccacggagaagcctggcgaaatcgtctgtgtga
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