Rhodococcus sp. JVH1: JVH1_03790
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Entry
JVH1_03790 CDS
T10360
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rhoj Rhodococcus sp. JVH1
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhoj03032
]
JVH1_03790
03036 Chromosome and associated proteins [BR:
rhoj03036
]
JVH1_03790
03400 DNA repair and recombination proteins [BR:
rhoj03400
]
JVH1_03790
DNA replication proteins [BR:
rhoj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JVH1_03790
Chromosome and associated proteins [BR:
rhoj03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JVH1_03790
DNA repair and recombination proteins [BR:
rhoj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JVH1_03790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
XEM87453
LinkDB
All DBs
Position
1:complement(800684..801376)
Genome browser
AA seq
230 aa
AA seq
DB search
MNKAELIDVLTEKLGTDRRTATEAVEHVVDTIVRAVHRGDSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVIAGGQKLPATGPAVKRGAAAPATKAAAKKAAA
KKTAAKKTAAKKAAPAKTTAAKKTAAKKAPAKTTAAKKTVAKKVAPAKTAAKKTAAKKAP
AKTTAAKKTVAKKVAPAKTAAKKTAAKKAPAKTTAAKKTAAKKAPAKRAK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggcagagctcatcgatgttctgaccgagaaactgggcacggacaggcgcacg
gcaacggaagctgtcgagcatgtcgtggacacgatcgtccgggcagtgcaccgcggcgac
agcgtgaccatcaccggtttcggcgtcttcgagcagcgtcgtcgcgcagcacgtgtcgca
cgcaacccgcgcacgggtgagaccgtcaaggtcaagccgacgtcggtgccggcgttccgt
ccgggcgctcagttcaaggcggttatcgctggcggccagaagcttccggccaccggtccg
gcagtcaagcgcggcgcagcggcgcccgccaccaaggctgccgccaagaaggctgctgca
aagaagacggctgccaagaagaccgcagccaagaaggcggccccggccaagaccacagcc
gcgaagaagaccgcagccaagaaggctccggccaagaccacggccgcgaagaagaccgtg
gcgaagaaggtggctccggccaagactgcagccaagaagactgcagccaagaaggctccg
gccaagaccacggctgcgaagaagaccgtggcgaagaaggtggctccggccaagactgca
gccaagaagactgcagccaagaaggctccggccaagaccacggctgccaagaagaccgca
gcaaagaaggctcccgcgaagcgcgccaagtaa
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