Rhodococcus sp. JVH1: JVH1_07055
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Entry
JVH1_07055 CDS
T10360
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rhoj Rhodococcus sp. JVH1
Pathway
rhoj00260
Glycine, serine and threonine metabolism
rhoj00460
Cyanoamino acid metabolism
rhoj00630
Glyoxylate and dicarboxylate metabolism
rhoj00670
One carbon pool by folate
rhoj00680
Methane metabolism
rhoj01100
Metabolic pathways
rhoj01110
Biosynthesis of secondary metabolites
rhoj01120
Microbial metabolism in diverse environments
rhoj01200
Carbon metabolism
rhoj01230
Biosynthesis of amino acids
rhoj01240
Biosynthesis of cofactors
rhoj04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JVH1_07055 (glyA)
09102 Energy metabolism
00680 Methane metabolism
JVH1_07055 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JVH1_07055 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JVH1_07055 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JVH1_07055 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JVH1_07055 (glyA)
Enzymes [BR:
rhoj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JVH1_07055 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
SelA
eCIS_core
Motif
Other DBs
NCBI-ProteinID:
XEM88059
LinkDB
All DBs
Position
1:complement(1502505..1503800)
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AA seq
431 aa
AA seq
DB search
MTAVPGTDVNTAPLAELDPEVAQAMAGELARQRDTLEMIASENFVPRAVLQAQGSVLTNK
YAEGYPGRRYYGGCEHVDVVEDLARNRAKELFGADFANVQPHSGAQANAAVLMALMNPGE
KLLGLDLAHGGHLTHGMKLNFSGKLYDVESYGVSKEDHRIDMDEVRKIAVAAQPKVIVAG
WSAYPRHEDFAAFRSIADEVGAYLWVDMAHFAGLVAAGLHPSPVPYADVVSSTVHKTLGG
PRSGLILAKQEWAKKLNSAVFPGQQGGPLMHAIAAKAVSLKIAGTEEFKDRQQRTLTGAK
ILAERLTGADVVDKGVSVLTGGTDVHLVLVDLRNSQLDGQQGEDLLHEVGITVNRNAVPF
DPRPPMVTSGLRIGTAALASRGFGDEQFTEVADIIGTALAGSSDVETLKSRVSKLAADFP
LYEGLEDWRLI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgtgcccggtaccgacgtcaacacggcccccctcgccgaactcgaccccgaa
gtcgcccaggccatggcaggtgagctggcccgtcagcgcgacacgctggagatgatcgcg
tcggagaacttcgttccccgcgcggtcctccaggcgcagggcagtgtcctcaccaacaag
tacgccgagggatacccgggacgccgctactacggcggctgcgagcacgtcgacgtcgtc
gaggatctcgcccgtaaccgcgccaaggaactgttcggcgccgacttcgcgaacgtccag
ccgcactccggcgcgcaggccaacgcggcggtcctgatggccctgatgaacccgggtgag
aagctcctcggcctcgacctggcgcacggcggtcacctcacgcacggcatgaagctgaac
ttctccggcaagctctacgacgtcgagtcgtacggggtcagcaaggaagaccaccgcatc
gacatggacgaggtccgcaagatcgccgtcgccgcgcagccgaaggtcatcgtcgccggc
tggtccgcctacccgcgtcacgaggacttcgccgcgttccggtcgatcgccgacgaggtc
ggcgcgtacctgtgggtcgacatggcgcacttcgccggcctggtcgcggccggcctgcac
ccgtcgcccgtgccctacgccgacgtcgtgtccagcaccgtccacaagacgctcggcggg
ccgcgctccggcctgatcctcgccaagcaggaatgggcgaagaagctcaactccgccgtc
ttccccggccagcagggcgggccgctgatgcacgccatcgccgccaaggccgtctccctg
aagatcgcgggcaccgaggagttcaaggaccgtcagcagcgcaccctgaccggcgcgaag
atcctcgccgagcgtctgactggcgcggatgtcgtcgacaagggcgtcagcgtcctcacc
ggcggcaccgacgtccacctcgtgctcgtcgacctgcgcaactcgcagctcgacggccag
cagggtgaggaccttcttcacgaggtcggcatcaccgtcaaccgcaacgcggtgccgttc
gacccgcgcccgccgatggtcacgtccggcctccggatcggtaccgcggcgctcgcatcg
cgtggattcggggacgagcagttcaccgaggtcgccgacatcatcggcaccgcactcgcc
ggatcgtccgacgtcgagacgctgaagtcccgcgtgtcgaagctcgccgccgacttcccg
ctgtacgagggtctcgaggactggcgcctgatctag
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