Rhodococcus sp. JVH1: JVH1_08820
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Entry
JVH1_08820 CDS
T10360
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
rhoj Rhodococcus sp. JVH1
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rhoj03110
]
JVH1_08820 (clpB)
Chaperones and folding catalysts [BR:
rhoj03110
]
Heat shock proteins
HSP100
JVH1_08820 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_22
AAA_16
ATPase_2
Sigma54_activat
nSTAND3
AAA_7
AAA_14
IstB_IS21
TniB
Mg_chelatase
NACHT
bpMoxR
AAA_24
T2SSE
NBD_SMAX1
Zeta_toxin
HOOK
AAA_19
Mis12
DNA_pol3_delta2
FTA4
Mod_r
Motif
Other DBs
NCBI-ProteinID:
XEM88394
LinkDB
All DBs
Position
1:complement(1869399..1871951)
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AA seq
850 aa
AA seq
DB search
MDSFNPTTKTQAAMTAALQSASSAGNPDIRPAHLLVALLDQTDGIAAPLLKAVGVDPTVV
HREGQDLVDRLPKTTGATTTPQLGREALAALTAAQHLATELDDEYVSTEHLMVGLASGES
DVAGLLKRHGATPEALRDAFTTVRGSARVTSPDPEGTYQALEKYSTDLTALARNGKLDPV
IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKSVISL
DLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQVITFIDELHTIVGAGATGESAMDAGNMI
KPMLARGELRLVGATTLEEYRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKERYEV
HHGVRITDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPEEIDTVERIV
RRLEIEEMALQKESDAASKDRLEKLRQELADEREKLNQLTTRWQNEKQAIDSVRGVKEQL
ETLRGEEERAERDGDLGRAAELRYGRIPQLEKELEQAARESGAAADGDVMLKEEVGPDDV
ADVVAAWTGIPAGRMMEGETAKLLRMESELGKRVVGQEEAVVAVSDAVRRARAGVADPNR
PTGSFLFLGPTGVGKTELAKSLADFLFDDERAMVRIDMSEYSEKHSVARLVGAPPGYVGY
EAGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLAVLDEGRLTDGQGRTVDFRNTILIL
TSNLGAGGSREQVMDAVRHAFKPEFINRLDDVVIFESLTEEQLESIVDIQLDQLSRRLAA
RRLTLDVSDSARFWLAVRGYDPMYGARPLRRLIQQAIGDQLAKLLLAGDVKDGDTVPVKV
SETGDALVLG
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
gtggactcgttcaatccgaccaccaagacccaggccgcgatgaccgctgcgctccagtcg
gcgtcgtcggccggtaatcccgacatcaggcccgcgcacctgctcgtggccctgctcgac
cagaccgacggcatcgccgccccgctactcaaggcggtcggcgtcgatcccaccgtggtc
catcgtgaagggcaggatctcgtcgaccggctgcccaagacgacgggcgccacgaccaca
ccgcagctcggccgcgaggccctcgccgcactcaccgcagcacagcacctcgccaccgaa
ctcgacgacgagtacgtgtcgacggaacacctgatggtcggtctcgcctcgggtgagtcg
gacgtggccggactgctgaagcggcacggcgccacccccgaggcgctgcgtgatgcgttc
actacggtccgcggcagtgcgcgcgtcaccagcccggatccggaagggacgtaccaggcg
ctcgagaagtactccaccgacctcaccgcgctggcccgcaacggcaagctcgacccggtg
atcggccgcgacaacgagatccgccgcgtcgtgcaggtactcagccgccggaccaagaac
aacccggtgctgatcggcgaacccggtgtcggcaagaccgccatcgtcgagggactcgcc
cagcgcatcgtcgcaggcgacgttcccgaatcgctgcgcggcaagtccgtgatctccctc
gacctcggatcgatggtggcgggcgccaagtaccgcggcgagttcgaggagcgactcaag
gccgtcctcgacgacatcaagaactcggccggtcaggtcatcacgttcatcgacgagctc
cacaccatcgtcggtgcgggtgccaccggtgagtccgcgatggacgcgggcaacatgatc
aagccgatgctcgcccgaggtgagctgcggctcgtcggcgcgaccacgctcgaggagtac
cgcaagtacatcgagaaggacgccgccctcgaacgtcgcttccagcaggtgctggtgggt
gaaccctccgtcgaggacaccgtcggcatcctgcgcgggctcaaggagcggtacgaggtg
caccacggtgtgcgcatcaccgactccgcgctcgtcgccgccgccacgctcagcgaccgc
tacatcacgtcccggttcctgccggacaaggcgatcgacctcgtcgacgaggccgcgtcc
cggctgcggatggagatcgactcgcgacccgaggagatcgacaccgtcgaacgcatcgtc
cgccggctcgagatcgaggagatggcgctgcagaaggaatccgacgcggcgtcgaaggac
cggctcgaaaagctgcggcaggaactggccgacgaacgcgagaagctcaaccagctgacc
acccgctggcagaacgagaagcaagccatcgactccgtgcgcggggtcaaggagcagctc
gagacgctgcgcggcgaggaggaacgcgccgaacgcgacggcgacctcggccgggccgcg
gagctgcggtacggccgcatcccgcagctcgagaaggaactcgagcaggcggcccgcgag
tccggcgccgccgccgacggcgacgtcatgctcaaggaggaagtgggtcccgacgacgtc
gcagacgtggtcgcggcatggaccggcatcccggccggccgcatgatggagggcgagacc
gccaagctgctgcggatggaatccgaactcggcaagcgggtcgtcggccaggaagaggcc
gtcgtcgccgtatcggatgcggttcgccgcgcccgcgccggagtcgccgaccccaaccgg
cccaccggttcgttcctgttcctcgggcccaccggcgtcggcaagactgaactcgcgaaa
tccctcgccgacttcctgttcgacgacgagcgcgccatggtccgcatcgacatgtccgag
tacagcgagaagcattcggtggcccggctcgtcggcgccccgcccggatacgtcgggtac
gaggcgggcggccagctcaccgaggccgtgcgacggcgtccgtacacggtggtgctgttc
gacgaggtggagaaggcgcacccagacgtgttcgacatcctgctggccgtcctcgacgaa
ggccggctgacggacggtcagggacgcaccgtcgacttccgcaacaccatcctgatcctc
acgtccaacctcggtgcgggtggatcgcgggagcaggtgatggatgcggtgcggcacgcg
ttcaagccggagttcatcaaccggctcgacgacgtcgtgatcttcgagtcgctcacggaa
gagcagctcgagtccatcgtcgacatccagctcgaccagctgtcccgccggctcgcggcg
cggcggctgacgctggatgtatccgactcggcccgcttctggctggcggtccgcggctac
gaccccatgtacggggccaggccgctgcgccggctgatccagcaggcgatcggcgaccag
ctggcgaagctgctgctcgccggtgacgtcaaggacggcgacaccgtccccgtgaaggtg
tccgagaccggggacgcgctcgtcctcggctga
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