KEGG   Rhodococcus sp. JVH1: JVH1_10795
Entry
JVH1_10795        CDS       T10360                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rhoj  Rhodococcus sp. JVH1
Pathway
rhoj03030  DNA replication
rhoj03430  Mismatch repair
rhoj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rhoj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JVH1_10795
   03430 Mismatch repair
    JVH1_10795
   03440 Homologous recombination
    JVH1_10795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rhoj03032]
    JVH1_10795
   03400 DNA repair and recombination proteins [BR:rhoj03400]
    JVH1_10795
Enzymes [BR:rhoj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JVH1_10795
DNA replication proteins [BR:rhoj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     JVH1_10795
DNA repair and recombination proteins [BR:rhoj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     JVH1_10795
SSDB
Motif
Pfam: RNase_T DEDDh_C
Other DBs
NCBI-ProteinID: XEM88744
LinkDB
Position
1:2342247..2342942
AA seq 231 aa
MTSWSDRPICAFDLETTGPDPTDARIVSACIAVVDAHHFESRTWLLDPEVPIPQGASDVH
GISTEYARAHGQDYATGYGEIREALHDAWTRDHAVVAFNASYDLTVMHTEGLRLGLAELV
TGIVVDPYVIDREMDRYRKGRRTLGAVCEHYGIALEDAHEAEADAIAAAHLARTLAQEYP
NLRALDIMTHQAGWHAERQRDFADYLVRQGRDASDVNGEWPIRGLAEFRIA
NT seq 696 nt   +upstreamnt  +downstreamnt
atgaccagctggtcggacagaccgatctgcgcgttcgacctggagacgacggggcccgac
cccaccgacgcccgcatcgtctccgcgtgcatcgccgtcgtcgacgctcaccacttcgag
tcgcgaacgtggctgctcgacccggaggttcccatcccgcagggcgcctcggacgtgcac
ggaatctccacggagtacgcccgggcccacgggcaggactacgccaccgggtacggggag
atccgcgaggctctgcacgacgcatggacccgcgaccatgccgtcgtcgctttcaacgcc
tcctacgacctgaccgtcatgcacaccgagggcctgcgcctcgggctggccgaactcgtc
accggcatcgtggtcgacccgtacgtcatcgaccgcgagatggaccggtaccggaagggc
aggcgcacactgggcgcggtgtgcgagcactacggcatcgccctcgaggacgcccacgag
gccgaggccgacgcgatcgccgccgcacacctcgcccggacgctcgcgcaggagtacccg
aatctgcgggccctcgacatcatgacgcatcaggccggctggcacgcagaacggcaacgc
gacttcgccgactacctcgtccggcagggcagggacgcatcggacgtcaacggcgagtgg
ccgattcgcggtctcgcagagttccgcatcgcctga

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