Rhodococcus sp. JVH1: JVH1_12390
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Entry
JVH1_12390 CDS
T10360
Symbol
purD
Name
(GenBank) phosphoribosylamine--glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
rhoj Rhodococcus sp. JVH1
Pathway
rhoj00230
Purine metabolism
rhoj01100
Metabolic pathways
rhoj01110
Biosynthesis of secondary metabolites
Module
rhoj_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
JVH1_12390 (purD)
Enzymes [BR:
rhoj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
JVH1_12390 (purD)
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Motif
Pfam:
GARS_A
GARS_N
GARS_C
ATP-grasp
ATP-grasp_3
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
XEM89050
LinkDB
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Position
1:complement(2733303..2734556)
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AA seq
417 aa
AA seq
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MRVLVIGSGAREHALLLALARDPGVSALMCAPGNAGIGKIAEQHPVDIASGEAVAALAKK
LDADLVVVGPEVPLVLGVADAVRAAGIACFGPSADAARIEGSKAFAKDVMAAAGVKTAHS
EIVDSPAKLDEALDRFGPNWVVKDDGLAAGKGVVVTTDRDAARDHAAELLENGHPVLLES
FLDGPEVSLFCVVDGETVVPLLPAQDHKRVGDGDTGPNTGGMGAYTPLPWLPEQTVTQIV
DDVVKPVAAELVARGSAFSGLLYAGLAIGKDGPAVVEFNCRFGDPETQAVLALLKSPLGE
LLNAAATGTLDQVAPLEWQDGSAVTVVVAAEHYPATPRTGDVITGADGDGVLHAGTKLVD
DQVVSAGGRVLSVVGVGADLDAARADAYSKISAIKLPGSHFRKDIGLAAVEGRIAIP
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgtactcgttatcggctccggagcccgtgaacatgccctccttctcgccctcgct
cgcgatccgggtgtcagtgccctgatgtgcgcgcccggcaacgccgggatcggcaagatc
gccgagcagcaccccgtcgacatcgcatccggggaggcggtggccgccctcgcgaagaag
ctcgacgccgacctcgtcgtggtggggcccgaggtcccgctggtgctgggtgtcgcagac
gccgtccgcgcggcaggcatcgcctgcttcggcccgtcggccgacgccgcgcgcatcgag
ggttccaaggcgttcgccaaggacgtcatggccgccgccggtgtgaagaccgcgcacagc
gagatcgtcgactcgcccgccaagctggacgaggcgctcgaccgcttcgggcccaactgg
gtggtcaaggacgacggcctcgcggcaggcaagggtgtcgtggtcaccaccgatcgggac
gccgcccgcgatcacgcggccgaactgctcgagaacggtcaccccgttctcctcgaatcc
ttcctcgacggtcccgaggtgtcgctgttctgcgtcgtcgacggcgagaccgtcgtgccg
ctgctgcctgcccaggaccataagcgcgtcggcgacggcgacaccggacccaacaccggc
ggcatgggcgcctacacgccgctgccgtggctgcccgagcagaccgtgacccagatcgtc
gacgacgtcgtgaagccggtcgcggccgagctcgtcgcccggggcagcgccttcagcggc
ctgctgtatgccggtctggcgatcggcaaggacggccccgccgtggtcgagttcaactgc
cgcttcggcgaccccgagacgcaggcggtcctcgcgctgctgaagagcccgctcggcgaa
ctgctgaacgccgcggccaccggaacgctcgatcaggtcgcgccgctcgaatggcaggac
ggctcggcggtgaccgtcgtggtcgcggccgagcactacccggccaccccgcgcaccggt
gacgtgatcaccggcgccgacggtgacggcgtcctccacgcaggcacgaagctcgtcgac
gatcaggtggtctccgccggcggacgcgtgctcagcgtggtcggagtcggagccgacctc
gacgcggcgcgcgcggatgcgtactccaagatctccgcgatcaagctgccgggaagccac
ttccgcaaggacatcggactggccgctgtcgagggacgcatcgccattccctga
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