Rhodococcus sp. JVH1: JVH1_15470
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Entry
JVH1_15470 CDS
T10360
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rhoj Rhodococcus sp. JVH1
Pathway
rhoj03030
DNA replication
rhoj03430
Mismatch repair
rhoj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JVH1_15470
03430 Mismatch repair
JVH1_15470
03440 Homologous recombination
JVH1_15470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhoj03032
]
JVH1_15470
03400 DNA repair and recombination proteins [BR:
rhoj03400
]
JVH1_15470
Enzymes [BR:
rhoj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JVH1_15470
DNA replication proteins [BR:
rhoj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JVH1_15470
DNA repair and recombination proteins [BR:
rhoj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JVH1_15470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
DnaX_C
AAA_16
AAA_30
Rad17
AAA_19
AAA_5
Mg_chelatase
AAA_14
nSTAND3
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
XEM89624
LinkDB
All DBs
Position
1:complement(3396993..3399251)
Genome browser
AA seq
752 aa
AA seq
DB search
MALYRKYRPASFSEVVGQEHVTEPLSTALDAGRINHAYLFSGPRGCGKTSSARILARSLN
CVEGPTSTPCGQCPSCVALGPGGSGNLDVTELDAASHGGVDDTRELRDRAFYAPAESRYR
VFIVDEAHMVTTAGFNALLKIVEEPPEHLIFIFATTEPEKVLPTIRSRTHHYPFRLLAPA
TMRGLLEKICQQESVPVADPVYPLVIRAGGGSPRDSLSILDQLLAGAGDEGVTYPRALAL
LGVTDVALIDDAVDALATGDGAALFGTVDRVMDAGHDPRRFAVDLLERLRDLILMQAVPD
AAERGLVDAPGDVLEHMRAQVQRIGPATLTRYAEVMHAGLGEMRGATAPRLLLEVMCARM
LLPSASDAESAVLQRLERVERGLPPAGSAPAVDAAERPAAAPARAPQQPAEPEPEPKFQR
PSMRQAAAATVPPPPEPEPEPMPRPVPEPAPTPVPEPTPAPEPAPVPEPTPAPEPAPVPA
PEPEPTPAPAPAPVPEPEPTPASEPTPAPEPTPEPEPEPPIAPEVEAEPAASAGPDAAAL
REAWNSLREKVSQRNKILPAMLSAATVHDVQGYRLILAHPVPNLGARIASPHNAQVITEV
LAEMFGGTWEVEYQAGAPTAPPPVAKAAAAPTKPAGAPRFSRPSQERTAQRPPQQQSDTQ
RSDSAGPAAGQARPSPEPDDDIPPPEAPDYPDDPGPIDYEASATTPPVSTPEDEEEMFAE
AAEPVDPTTRRDPEDVAFELLKDMLGAKKLEG
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
gtggccctgtaccggaagtaccgacccgcatccttctctgaggtggtggggcaggagcac
gtcaccgaaccactgagcaccgctctcgacgccggacggatcaaccacgcgtatctgttc
tccggtccccgcggctgtggcaagacgtcgtctgcccgcatcctggcccgatcgctgaac
tgcgtcgagggtcccacctcgacaccgtgcggccagtgtccctcgtgcgtggcgctcggc
cccggcggttcgggcaacctcgacgtcaccgaactcgacgcggccagccacggtggtgtc
gacgacacccgtgagctgcgcgaccgcgcgttctacgcccccgccgaatcccggtaccgg
gtgttcatcgtggacgaggcccacatggtcaccacggccggtttcaacgcgctcctcaag
atcgtcgaggagccgccggagcacctcatcttcatcttcgccaccaccgaacccgagaag
gtgctgccgaccatccgttcgcgcacccatcactacccgttccggttgctcgcaccggcg
acgatgcgcgggttgctggagaagatctgccagcaggagagtgtgccggtcgcggacccg
gtgtatccgctggtcatccgtgcgggtggcggttcgccgcgtgactcgctgagcatcctc
gatcagctgctcgccggagcgggcgacgagggcgtcacctacccgcgcgcgctcgcgctg
ctcggcgtcaccgacgtcgcgctcatcgacgatgccgtcgatgcgctcgccaccggcgac
ggtgcagcgctgttcggaacggtcgaccgcgtgatggacgccggacacgatccgcgccgg
ttcgccgtcgacctgctcgagcgtctgcgcgacctcatcctgatgcaggcggtgcccgac
gccgccgaacgtggcctggtcgacgcgcccggcgacgtgctcgagcacatgcgcgcccag
gtccagcggatcggtcccgccacgctcacccgctacgccgaggtgatgcacgcaggtctc
ggtgagatgcgcggcgccaccgccccccgcctcctgctcgaagtgatgtgcgcccggatg
ctgctgccctcggcgtccgatgcggagtccgccgtgctgcagcgactcgaacgcgtcgaa
cgcggacttccgcccgccgggtcggcgccggccgtcgacgcggccgagcggcccgcggcg
gctcctgcgcgtgcgccacaacaacccgccgagccggagccggaaccgaagttccagcga
ccgtcgatgcgccaggccgcggcggccaccgtccccccgccgcccgagccggaacccgaa
ccgatgccgcggccggttccggagcccgcgccgacacctgttcccgaaccgacgcccgcg
cccgagccggcccctgtccccgaaccgacgcccgcgcccgagccggcccctgttcccgcg
cccgagcccgagccgactcccgcaccggcgcccgctccggtcccggaacccgagccgacc
cctgcatcggagccgactcctgcaccggagccgactcccgaacccgagccggagccgccg
atcgcccccgaggtggaggcggagcccgccgcatccgccggcccggatgctgccgcgctg
cgggaagcctggaattcgctgcgcgaaaaggtgagtcagcggaacaagatcctgcctgcc
atgttgtcggccgcgacggtgcacgacgttcagggctaccgcctgatcctggcgcacccc
gttcccaacctgggcgctcgcatcgcgtcgccgcacaacgcccaggtgatcaccgaggtg
ctcgccgagatgttcggcggcacctgggaagtggagtaccaggccggtgctccgacagcg
ccgccgccggtcgcgaaggccgccgcagcgccgacgaaaccggcaggcgcaccacggttc
tcccggcccagccaggagcggaccgcacagcgcccgccgcagcagcagtccgacacgcag
cgctccgattcggcgggtccagctgcgggacaggcacgtccgtcgcccgaaccggacgac
gacattccgccgccggaggcacccgactacccggatgatcccgggccgatcgactacgag
gcttcggcgaccacgccgcccgtctccacacccgaggacgaggaagagatgttcgcggag
gcggcggaacccgtcgatcccacgacgcgccgcgacccggaagacgtggcgttcgaactg
ctcaaggacatgctcggggccaagaagctcgagggctga
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