Rhodococcus sp. JVH1: JVH1_15970
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Entry
JVH1_15970 CDS
T10360
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rhoj Rhodococcus sp. JVH1
Pathway
rhoj00521
Streptomycin biosynthesis
rhoj00523
Polyketide sugar unit biosynthesis
rhoj00525
Acarbose and validamycin biosynthesis
rhoj00541
Biosynthesis of various nucleotide sugars
rhoj01055
Biosynthesis of vancomycin group antibiotics
rhoj01100
Metabolic pathways
rhoj01110
Biosynthesis of secondary metabolites
rhoj01250
Biosynthesis of nucleotide sugars
Module
rhoj_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JVH1_15970 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JVH1_15970 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
JVH1_15970 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JVH1_15970 (rfbB)
00525 Acarbose and validamycin biosynthesis
JVH1_15970 (rfbB)
Enzymes [BR:
rhoj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
JVH1_15970 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
adh_short
Sacchrp_dh_NADP
NmrA
Motif
Other DBs
NCBI-ProteinID:
XEM89711
LinkDB
All DBs
Position
1:complement(3489695..3490699)
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AA seq
334 aa
AA seq
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MRLLVTGGAGFIGANFVHQTVAERPDVQVTVLDALTYAGNRRSLDPVSDRIEFVHGDVAD
FALVDRLVADSDAVVHFAAESHNDNSLADPTPFVQTNVIGTFSLLQAVRAHDVRYHHIST
DEVYGDLELDDPERFTESTPYNPSSPYSATKASSDLLVRAWARSFGVRATLSNCSNNYGP
YQHVEKFIPRQITNLIDGVRPRLYGSGKNVRDWIHVDDHNAAVWTILEKGSLGQTYLIGA
DGEVDNRTVVGTLLELFGRDADDLDFVTDRPGHDLRYAIDSTRLRTELGWTPQYKDFRSG
LEATVRWYRDNELWWRAQKESAEKAYAATESVIG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttctcgtgacaggcggcgccgggttcatcggtgcgaatttcgtgcaccagacg
gtcgccgagcgcccggacgtgcaggtgacggtgctcgacgcgctgacgtacgcaggcaac
cggcggtcgctcgacccggtgtccgatcgcatcgagttcgtgcacggcgatgtggcggat
ttcgcgctggtagaccgtctggtcgcggactcggacgcggtggtccacttcgccgccgaa
tcgcacaacgacaattcgctggccgatccgacgccgttcgtgcagacgaacgtgatcggc
acgttctcgctgttgcaggccgtccgcgcccacgacgtccggtatcaccacatctccacc
gacgaggtgtacggcgacctcgaactggacgaccccgagcgcttcaccgagtcgactccg
tacaacccgtcgagcccgtactcggccaccaaggcgtccagcgacctgttggtgcgggcc
tgggcgcggtcgttcggggtgcgggccaccctgtcgaactgttccaacaactacggcccg
taccagcacgtggagaagttcattccgcgccagatcaccaacctgatcgacggggtgcgc
ccccgcctgtacggcagcgggaagaacgtgcgcgactggatccacgtcgacgaccacaac
gcggccgtctggacgatcctggagaaggggagtctcggtcagacgtatctgatcggtgcg
gacggcgaggtcgacaaccggaccgtcgtcggaacgctgctcgagctgttcggccgcgac
gccgacgacctcgacttcgtcaccgaccgcccgggccacgacctgcgttacgcgatcgat
tcgacgcggctgcgcaccgaactgggctggacgccgcagtacaaggatttccgcagcggc
ctcgaggccaccgtgcggtggtaccgcgacaacgagttgtggtggcgggcgcagaaggaa
tccgcggagaaggcgtacgcggccacggaatccgtcatcggctga
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