Rhodococcus sp. JVH1: JVH1_16020
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Entry
JVH1_16020 CDS
T10360
Symbol
rhaS
Name
(GenBank) rhamnose ABC transporter substrate-binding protein
KO
K10559
rhamnose transport system substrate-binding protein
Organism
rhoj Rhodococcus sp. JVH1
Pathway
rhoj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JVH1_16020 (rhaS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhoj02000
]
JVH1_16020 (rhaS)
Transporters [BR:
rhoj02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
JVH1_16020 (rhaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
XEM89721
LinkDB
All DBs
Position
1:complement(3500168..3501244)
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AA seq
358 aa
AA seq
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MTRFRRTFVPLAGIVAVSIGLTACGGTTQDSASNSGGGDRATGTANPDAPIQDGLQVAFL
PKQLNNPYSDIEVGGGETAVEEFGGEYKLVGPNDASASSQVSYINTLIQQGQNVINIAAN
DPNAVCPSLNQARDAGIKVVTFDSDAAEDCRDLFINQATTQGVGETLAKMTSEQIGGTGK
IAVLSATPNATNQNAWIEVLKAELASKPEYQNIELVATVYGNDDDQKSFQETQGLLQTYP
DLKAIVSPTTVGIAAAARYISSSSYKGNIVLTGLGTPNQMREYVKNGTVKEFALWDPTNI
GYLSAYAGAALASGQITGAEGQKFTAGKLGEYTIGAGGEVVLGPPTVFDANTIDQYNF
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgacccgattccgccggaccttcgttcccctggcggggatcgtcgcagtctcgatcgga
ctgacggcctgcggcggcaccacccaggattcggcgtcgaactcgggaggtggcgaccgc
gccaccggtaccgcgaaccccgacgcgccgatccaggacggcctgcaggtcgcgttcctc
cccaagcagctcaacaacccgtactccgacatcgaggtcgggggcggcgagaccgcagtg
gaggagttcggcggcgagtacaagcttgtcggccccaacgatgcgagcgcgtcctcgcag
gtgtcctacatcaacacgctgatccagcagggccagaacgtgatcaacatcgcggccaac
gacccgaacgccgtgtgcccgtcgctgaaccaggcccgcgacgccggcatcaaggtcgtg
acgttcgattcggacgcggccgaggactgccgcgacctgttcatcaaccaggccaccacc
cagggggtcggggagacgctcgcgaagatgacgagcgagcagatcggcggcaccggcaag
atcgcggtgctgtccgccacccccaacgccaccaatcagaacgcctggatcgaggtgctg
aaggccgagctcgcgagcaagcccgagtaccagaacatcgagctggtggccacggtgtac
ggcaacgacgacgaccagaagtcgttccaggaaacgcagggcctcctgcagacgtacccc
gacctgaaggcgatcgtgtcgcccacgacggtcggcatcgccgcggcggcgcgctacatc
tcgtcgtcgagctacaagggcaacatcgtgctcaccggcctcggcaccccgaaccagatg
cgggagtacgtgaagaacggcaccgtcaaggaattcgccctctgggacccgaccaacatc
ggctacctctccgcctacgccggtgccgcgctggcatccggccagatcaccggcgccgag
gggcagaagttcacggcaggcaagctcggcgagtacacgatcggcgccggcggcgaggtc
gtcctcggcccgcccaccgtgttcgacgcgaacaccatcgaccagtacaacttctga
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