Rhodococcus sp. JVH1: JVH1_16130
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Entry
JVH1_16130 CDS
T10360
Symbol
pks13
Name
(GenBank) polyketide synthase Pks13
KO
K12437
polyketide synthase 13
Organism
rhoj Rhodococcus sp. JVH1
Pathway
rhoj00074
Mycolic acid biosynthesis
rhoj01100
Metabolic pathways
rhoj01110
Biosynthesis of secondary metabolites
Module
rhoj_M00887
Mycolic acid biosynthesis, meromycolic acid + alpha-carboxyacyl-CoA + trehalose => TMM => TDM/mAGP/GMM
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09100 Metabolism
09103 Lipid metabolism
00074 Mycolic acid biosynthesis
JVH1_16130 (pks13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhoj01004
]
JVH1_16130 (pks13)
Lipid biosynthesis proteins [BR:
rhoj01004
]
Polyketide synthase
Modular PKS
JVH1_16130 (pks13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
ACP_SdgA_C
Thiolase_N
RhiE-like_linker
CurL-like_PKS_C
Motif
Other DBs
NCBI-ProteinID:
XEM89743
LinkDB
All DBs
Position
1:complement(3528337..3533331)
Genome browser
AA seq
1664 aa
AA seq
DB search
MTVAQLREWLRNWIADATGQPVGQITDDRPMEEFGLSSRDAVALSGEIEELVGVTLTATV
AYQHPTIASLATRIIEGEPEQLDDSADAAYYASAPTSDAHDIAIVGLASRFPGAGKTPAE
MWQMLAEGRDGISDLPEGRWEEFTSDPQIKAAVEKANTQGGYLDDVKTFDAEFFAMSPLE
VANVDPQQRLAMELTWEALEHARIPASDLKGEQVGVFIGSSANDYQLLAVSDPVHAHPYA
LTGTSTSIVANRVSYFYDFRGPSIALDTACSSSLVAVHQAVRSLRSGESDLALAGGVNML
VAPPATLGFDQLGVMAPNGRIKAFSSDADGMIRAEGGGLVVLKRLEDAERDGDEILAVIA
GSAVNQDGRSNGLAAPNPDAQADVLRHAYRDAGINPAGVDYIEAHGTGTILGDPIEADAL
GRVVGRGRADDKPALLGSAKTNFGHLEAAAGAAGLIKVVLSMQEDTLPPTLNFAGPNPYI
AFDKAHLQVIPEGAAWPRYTGTAVAGVSGFGFGGTNAHVVVREYTGPAADDAAEITEPAV
RAEESVAEAVEPTVVLAVSGALPSRRRRAAADLADWLETEEGSTTPLADVARSLARRNHG
RSRAVVLAKTRSEAVTGLRAIAAGKPGQGVFSADSPSSKGAVWVLSGFGSQHRKMAKQLY
LENPVFAAAIDEVDALIEDEAGYSMKEKFLDDAIDYDVETSQVGIFTIQIGLAALLRHHG
AEPEAVVGHSMGEAAAAYISGGLPLEDAVRVICARSRLMGEAEATLEGDDIRLMALVEYS
ASEIETVLTDFPHLEVCVYAAPTHTVIGGPEPEVNAIVARAEGEEKMARVLKTKGASHTS
QVDPLLGELAAELAGIEPTKLKLGVYSSVDQDTYYRAGHEPIHREEYWTKGLRHSVYFTN
AVRLAVGSGHTTFVELAPNPVALMSVAATAFDAGLHDMQLIQTLKRKEDEPLGVLAALAQ
LYVHGHAVDLSSLLPEGDFASVPRTAWIRKPYWVETRIDSSGNTRVPGAHVSLPDGRHVW
EVQAGAVTDLPALVTAAASQVLSDVTLAASVLHAHAPAEGTLTTTLNPHPGGASLQVHAK
SGPSFTLLFDAAVTSGAALPEPVVAPPVQSTSPVEELPEVVEDIGEKWDPNGSQTLEDRL
ALIVAESMGYAPEDLPAEIPLIELGLDSLMAVRIKNRVEYEFDIPQLQLQAVRDANLMEV
GKYLRYAVENREEVQALADKQKAEKEAEEAAEAAEADRDAGADRDAEAARDSEVAASPLD
AEDTSVEAEAEAILAATPVPETAAAPEAAAVDSQEAFADATDSDVPPRDAAERLTFATWA
VVTGESAKGIFNTLPILNDETAEKLAARLSERANGEITFDDVLDSTTIEELANVVRGFLE
DSGKIDGLVRALRPRPEGSDAVPVFVFHPAGGSTVAYEPLLKRLPEGTPMYGFERTEGPI
EVRAAEYLPLIREIQGDGPYVLYGWSLGGVLAYAVAKLLRESGADVRIVGLIDTVMAGEK
VEDTPDEIRKRWQRYAAFAKKTYNVDYPLPYDKLAAAESDEEQIKILTELLKLSGTKIPG
GIIEHQRTSWLDNRAIQTAELEQYDGDVVLYMADRYHDDVMNLEPAFKTRKPDGGWGDAV
KNLEIIHVGGDHIQIVDEPYIAKVGADLTKKLAAIQAAGTGAHQ
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcgcgcagctgcgcgagtggctgcgtaactggattgccgacgcaaccgggcaa
ccggtcggtcagatcaccgacgaccgcccgatggaagagttcggtctgtcgtctcgcgac
gccgtcgcgctcagcggcgagatcgaggaactggtcggcgtcacgctcaccgcgaccgtc
gcctaccagcaccccaccatcgcgtcgctggccacccgcatcatcgagggcgaacccgag
cagctcgacgactcggccgacgccgcgtactacgcgtcggcgccgacgtcggatgcgcac
gacatcgcgatcgtgggcctggcttcccgtttccccggtgcgggtaagactcctgccgag
atgtggcagatgctcgcggagggccgcgacggaatctccgacctgcccgagggtcgctgg
gaggagttcacctccgacccgcagatcaaggcggccgtcgagaaggccaacacgcagggc
ggctacctcgacgacgtgaagaccttcgatgcggagttcttcgcgatgtctccgctggag
gtcgcgaacgtcgacccgcagcagcgccttgcgatggaactgacgtgggaggcactcgag
cacgctcgcatcccggccagcgacctcaagggtgagcaggtcggtgtgttcatcggcagc
tcggccaacgactaccagttgctcgcggtcagcgaccccgtccacgcgcacccgtatgcg
ctgaccggtacgtcgacgtccatcgtcgccaaccgggtttcgtacttctacgacttccgc
gggccgtccatcgccctcgacacggcgtgctcgtcgtcgctcgtcgcggtgcaccaggcg
gtccgctcgctgcggtccggtgagtcggatctcgcgctcgccggcggggtcaacatgctg
gtggcgccccccgccacgctgggcttcgaccagctgggtgtgatggcccccaacggccgc
atcaaggcgttctcctccgacgccgacggcatgatccgcgcagagggcggcggtctcgtg
gtcctcaagcgtctcgaggacgccgagcgtgacggcgacgagatcctcgccgtcatcgcc
ggcagcgccgtcaaccaggacggccgctccaacggtctcgcggccccgaacccggatgcg
caggccgacgtcctgcgccacgcctaccgggacgcgggcatcaaccccgccggtgtcgac
tacatcgaggcgcacggcaccggcaccatcctcggcgaccccatcgaggccgacgcgctc
ggacgcgtcgtcgggcgtggacgcgccgacgacaagcccgcgttgctcggctcggccaag
accaacttcggtcacctcgaagccgccgcgggcgccgcgggcctgatcaaggtcgtgctg
tcgatgcaggaagacaccctgccgccgacgctgaacttcgccggacccaacccgtacatc
gcgttcgacaaggcgcacctgcaggtcattcccgagggtgcggcgtggccgcgctacacg
ggcacggccgtcgccggtgtgtccggcttcgggttcggtggcaccaacgcgcacgtcgtc
gtgcgcgagtacaccggacctgccgcggatgacgcggccgagatcaccgagcccgctgtt
cgcgccgaggaatcggtggccgaggccgtcgagccgacggtcgttctcgccgtgtcgggt
gcgctgccgtcgcgtcgtcgccgtgccgccgccgatctggccgactggctggagaccgaa
gagggcagcaccactccgctcgccgacgtcgcgcgctctctcgcccgccgcaaccacggc
cgctcgcgtgccgtcgtcctggcgaagacccgctccgaggccgttaccgggctccgcgcc
atcgccgccggaaagcctgggcagggtgtgttctcggcggattcgccgtcgtcgaagggc
gccgtctgggtcctgtcgggcttcggttcgcagcaccgcaagatggccaagcagctctac
ctggagaacccggtcttcgcggccgccatcgacgaggtcgacgcgctgatcgaggacgag
gccggctactccatgaaggagaagttcctcgacgacgcgatcgactacgacgtcgagacc
tcccaggtcggcatcttcaccatccagatcggtctggcggccctgctgcgtcaccacggc
gccgagcccgaggccgtggtcggacactcgatgggtgaggctgccgccgcgtacatctcg
ggtggtctgccgctcgaggacgcggtgcgggtgatctgcgcccggtcccgcctcatgggc
gaggccgaggccacgctcgagggcgacgacatccgtctgatggcgctcgtcgagtacagc
gcgtccgagatcgagaccgttctcaccgacttcccgcacctcgaggtctgcgtgtacgcg
gcgccgacgcacaccgtgatcggtggccccgagcccgaggtcaacgccatcgtcgcgcgc
gccgagggcgaggagaagatggcccgcgtcctcaagacgaagggcgccagccacacctcc
caggtcgatccgctgctgggcgagctggccgcggaactggcgggcatcgagccgaccaag
ttgaagctgggcgtgtactcgtcggtcgaccaggacacgtactaccgcgccggccacgag
ccgatccaccgcgaggagtactggaccaagggtctgcgccacagcgtgtacttcaccaac
gccgtccgcctcgccgtgggcagcgggcacaccacgttcgtggagctggcgcccaacccg
gtagccctgatgtccgtcgccgccaccgcgttcgacgccggtctgcacgacatgcagctc
atccagacgctcaagcgcaaggaggacgagccgctcggtgttctcgcagcgctcgcgcag
ctgtacgtgcacgggcacgccgtcgacctgtcgtcgctgctccccgagggcgacttcgcg
tccgttccgcgcaccgcgtggatccgcaagccgtactgggtggagacccgcatcgattcc
agcggcaacacccgcgtccccggtgcgcacgtgtcgctgcccgacggccgccacgtgtgg
gaggtccaggcaggcgcggtcaccgacctgcccgcactggtcaccgccgccgcgtcgcag
gtgctgtcggacgtgacgctcgccgcgtccgttctgcacgcccacgctccggcggagggc
acgctcaccaccacgctcaacccgcatccgggtggcgcgtcgctgcaggtgcacgcgaag
agcggcccgagtttcacgctgctgttcgatgccgccgtcacgtccggtgcggcgcttccc
gaacccgtcgtcgcgccgccggtgcagtcgacctccccggtggaggagctgcccgaggtc
gtcgaggacatcggtgagaagtgggacccgaacggttcgcagaccctcgaggatcgtctg
gcgctgatcgtcgccgagtccatgggctacgccccggaagacctgcccgccgagatcccg
ctcatcgagctgggcctcgactcgctgatggccgtccgcatcaagaaccgtgtcgagtac
gagttcgacatcccgcagctgcagctgcaggcggtccgggacgcgaatctgatggaggtc
ggcaagtacctgcgctacgcggtcgagaaccgcgaagaggtgcaggcgctggccgacaag
cagaaggccgagaaggaagcggaggaggcggcagaggccgcggaggccgaccgtgacgcg
ggggccgaccgtgacgcagaggccgctcgtgactccgaagtcgctgcgtccccgctcgac
gccgaggacacgtccgtggaggccgaggccgaggcgatcctcgcggccaccccggtgccg
gagacggccgcggctcccgaggcagccgccgtggacagccaggaagcgttcgccgacgcg
accgattccgacgttccgccgcgcgacgccgccgagcgcctgacgttcgccacgtgggcc
gtcgtcaccggcgagtccgccaagggcatcttcaacacgctgccgatcctgaacgacgag
acggctgagaagctggcggcgcggttgtcggaacgcgcgaacggtgagatcacgttcgac
gacgtcctcgactccaccaccatcgaggaactcgccaacgtggtgcgtggattcctcgag
gattccggcaagatcgacgggctggtccgcgcgctgcggcctcgcccggaaggatccgac
gccgtccccgtgttcgtgttccacccggccggtggttcgaccgtcgcgtacgagccgctg
ctgaagcgtctgcccgagggcacgccgatgtacgggttcgaacgcaccgagggtccgatc
gaggtccgggcggcggagtacctgccgctgatccgcgagatccagggtgacggaccgtac
gtgctctacggctggtcgctgggcggtgtgctggcgtacgcggtggcgaagctgctgcgt
gagtcgggcgcggacgttcgcatcgtcggcctgatcgacacggtcatggccggtgagaag
gtcgaggacacaccggacgagatccgtaagcgctggcagcggtacgccgcgttcgcgaag
aagacgtacaacgtggactacccgctgccgtacgacaagctcgccgcagcggagagcgac
gaagagcagatcaagatcctgacggaactgctcaaactgagtggcacgaagattccgggt
ggaatcatcgagcaccagcgcacgtcgtggctcgacaaccgggccatccagaccgcagag
ctcgagcagtacgacggcgacgtcgtcctgtacatggccgaccgctaccacgacgacgtg
atgaacctggagcccgcgttcaagacccggaagccggacggcggctggggcgacgcggtg
aagaacctggagatcatccacgtgggcggcgatcacatccagatcgtcgacgagccgtac
atcgcgaaggtcggtgccgacctcaccaagaagctggcggcgatccaggccgccgggacc
ggagcgcatcagtga
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