Rhodococcus sp. JVH1: JVH1_18220
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Entry
JVH1_18220 CDS
T10360
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rhoj Rhodococcus sp. JVH1
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhoj03032
]
JVH1_18220 (gyrA)
03400 DNA repair and recombination proteins [BR:
rhoj03400
]
JVH1_18220 (gyrA)
Enzymes [BR:
rhoj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JVH1_18220 (gyrA)
DNA replication proteins [BR:
rhoj03032
]
Prokaryotic type
DNA Topoisomerases
JVH1_18220 (gyrA)
DNA repair and recombination proteins [BR:
rhoj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JVH1_18220 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
XEM90139
LinkDB
All DBs
Position
1:complement(3949993..3952515)
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AA seq
840 aa
AA seq
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MTDTTLPPEGPGHDRIEPVDIQQEMQSSYIDYAMSVIVGRALPDVRDGLKPVHRRVLYAM
YDNGYRPDRGYVKSARPVAETMGNYHPHGDASIYDTLVRMAQPWSLRYPLVDGQGNFGSR
GNDGAAAMRYTECRLTPLAMEMLREIDHETVDFTPNYDGRTQEPSVLPSRIPNLLINGSG
GIAVGMATNIPPHNLREVAEAIYWALENWEADEESTLTAVMERVKGPDFPTHGLIVGGQG
IHDAYTTGRGSVRMRGVVEIEEDAKGRTTIVITELPYQVNPDNLITSIAEQVRDAKIAGI
SDIHDESSDRAGMRIVVTVKRDAVAKVVLNNLYKHTQLQTSFGCNMLSIVDGVPRTLRLD
QMIRLYVAHQVEVIRRRTEYLLRKAEERAHILRGLVKALDALDEVIALIRASQTVDIARA
GLIELLTVDEIQADAILAMQLRRLAALERQKIIDELAEIEREIADLKDILEKPERQRRIV
RDELKEIVDKHGDDRRTRIIAADGDVADEDLIAREDVVVTITETGYAKRTKTDLYRSQKR
GGKGVQGAGLKQDDIVSHFFVSSTHDWLLFFTTKGRVYRAKAYELPEASRTARGQHVANL
LAFQPDERIQSVIQIKTYEDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAINLRGEDEL
VGAVLCSSDDDLLLVSAQGQSIRFSATDEALRPMGRATSGVQGMRFNGDDELLSLNVVRE
GTYLLVATSGGYSKRTGMEDYPVQGRGGKGVLTIQYDKKRGTLVGALIVNDDDELYAITS
GGGVIRTAAKQVRKAGRQTKGVRLMNLGEGDTLLAIARNADEPDEPDDNAESSGKGAKES
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgactgacacaacgttgccgccggagggaccggggcacgaccgcatcgagcccgtcgac
attcagcaggagatgcagagcagctacatcgattacgcgatgagcgtgatcgtgggccgt
gcgctgcccgacgtgcgcgacggcctcaagccggtgcaccgccgcgttctgtacgcgatg
tacgacaacggttaccggcccgatcgcggttatgtgaagtctgcgcgaccggtcgccgag
acgatgggtaactaccacccccacggtgacgcctcgatctacgacacgctcgtgcgcatg
gcccagccgtggtcgctgcggtacccgctcgtcgacggccagggcaacttcggttcccgc
ggcaacgacggcgccgccgcgatgcgatacaccgagtgccggctcaccccgctggccatg
gaaatgctgcgtgagatcgaccacgagacggttgatttcaccccgaactacgacggtcgt
acacaggaaccgtcagttctccccagccgtatccccaacctgttgatcaatggttccggc
ggcatcgccgtcggtatggccaccaacatcccgccgcacaatctgcgggaggtcgccgaa
gccatctactgggcgctcgagaactgggaagccgacgaggagtccaccctcaccgcggtc
atggaacgcgtcaagggacccgacttcccgacgcacggcctgatcgtcggcggccagggc
atccacgacgcctacaccaccggacgcggttcggtccgcatgcgcggtgtggtggagatc
gaggaggacgccaaggggcgcaccacgatcgtcatcaccgagctgccgtaccaggtgaac
ccggacaacctgatcacgtcgatcgccgagcaggtgcgcgacgcgaagatcgccggcatc
tccgacatccacgacgagtcctcggaccgcgcgggtatgcgcatcgtcgtcaccgtcaag
cgtgacgcggtcgcgaaggtcgtgctcaacaacctgtacaagcacacccagctgcagacc
agcttcggctgcaacatgctgtccatcgtcgacggcgtgccgcgcaccctgcgcctcgac
cagatgatccggctgtacgtcgcccaccaggtcgaggtcatccgcaggcgcaccgagtac
ctgctccgcaaggccgaggaacgcgctcacatcctgcgcggactggtgaaggcgctcgac
gccctcgacgaggtcatcgcgctgatccgggcgtcgcagaccgtcgacatcgcacgggcc
ggcctgatcgaactcctcaccgtcgacgagatccaggccgacgcgatcctcgcgatgcag
ctgcgtcgtctcgccgccctcgagcgtcagaagatcatcgacgaactcgccgagatcgag
cgggagatcgccgacctcaaggacatcctcgagaagcccgagcgtcagcgccggatcgtc
cgcgacgagctgaaggagatcgtcgacaagcacggcgacgaccgccgcacccgcatcatc
gccgccgacggtgacgtggccgacgaggatctgatcgcccgcgaggacgtcgtcgtcacg
atcaccgagaccggctacgccaagcgcaccaaaaccgacctgtaccgctcgcagaagcgc
ggcggcaagggcgtgcagggcgccggactgaagcaggacgacatcgtctcgcacttcttc
gtcagctccacgcacgactggctgctgttcttcaccacgaagggccgcgtctaccgggcc
aaggcgtacgagctgccggaggcgagccgcacggcccgcggacagcacgtggccaacctg
ctcgcgttccagcccgacgagcgcatccagagcgtcatccagatcaagacctacgaggac
gccccctacctggttctcgccacccgcaacggtctggtgaagaagtccaagctcaccgac
ttcgactcgaaccgcagcggcggcatcgtcgccatcaacctgcgcggcgaggacgaactg
gtcggcgcggtgctctgctcctccgacgacgacctgctgctcgtctccgcgcagggacag
tcgatccgcttctccgcaaccgacgaggcgctgcgtccgatgggccgcgccacgtccggt
gtccagggcatgcgattcaacggcgacgacgaactgctgtcgctgaacgtcgtgcgcgaa
ggcacctatctgctggtggcgacgtcgggtggctactcgaagcgcaccggtatggaggat
tacccggtccagggtcgcggcggaaagggtgtactcacgattcaatacgacaagaaacgt
ggcaccctggtcggagcgctcatcgtgaacgacgacgacgagctctacgcgatcacgtcg
ggcggtggcgtcatccgcaccgccgccaagcaggtccgcaaggccggtcggcagaccaag
ggcgttcggttgatgaacctcggggaaggcgacaccctgctcgcgatcgcgcgcaatgcc
gacgaacccgacgaacccgacgacaacgccgagagcagcggcaaaggagctaaggagtcc
tag
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