Rhodococcus sp. JVH1: JVH1_19165
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Entry
JVH1_19165 CDS
T10360
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rhoj Rhodococcus sp. JVH1
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhoj03000
]
JVH1_19165
Transcription factors [BR:
rhoj03000
]
Prokaryotic type
Helix-turn-helix
Other families
JVH1_19165
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_8
AAA_lid_14
AAA_22
HTH_30
HTH_50
HTH_23
Xre-like-HTH
RuvB_N
AAA_16
UBA
Motif
Other DBs
NCBI-ProteinID:
XEM90310
LinkDB
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Position
1:4156634..4158322
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AA seq
562 aa
AA seq
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MTDSSGVNDKVLRPEIAASWRRSEIAGLTHEIVLERLQIGDFESSSQLLTAAVPVLDGVA
RDLTGLTYSLLLADADCRIVGRWFDRPTIDTTLQRAGAVTGSRWKESDVGTNGLGTPAEV
RSGMWVHGAEHFAAVLSGFTCYGLPILHPLTRRVEGVLNITVHPDDAHPLFPPTLTRVVD
DIEQRLIDTSRPADSRLFRAFREACRTGRAIVALNDHLMLASNAAVAMAEDLDLETMREI
ARSAAHRGTSTVESLLLLSGAMVTARIDRLHDLSHGAVFWLRPRSGPHAAPGAQPANRSH
LVSAERATSTAVASVFVEGEPGSGRSTVARSLLDGTSVTVIDALDCLVEDSTDWAGRLAG
VIDGGAGGLVIDNVHVLPGQLVDLLARTLSVDHHSMPIVLAGNPQAWLPAHVQPLVRRCR
QVVALKPLRERRNEFPVLAQSVIDALEPGRTRRLAPSAVRVLTAQPWPGNIPELREVLRH
ALANRPFGALEVVDLPAAYRVRPVPALAGRENAERHAIIEALRRFDGNKTRAAQFLGITR
TTLYNRLRALKITDDTVHFLHS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgacggactcgtccggagtcaacgacaaggtgctgcgcccggagatcgccgcgtcgtgg
aggcggtcggagatcgccggactcacccacgagattgtcctcgagcgactgcagatcgga
gacttcgagtcgtcgagtcagctgctaaccgcggccgtacctgtgctcgacggcgtggcc
cgtgacctgacggggctgacgtacagcctgcttctcgccgatgcggactgtcggatcgtc
ggacgctggttcgaccggccgacgatcgacacaacactccagcgcgccggcgccgtgaca
ggttcgaggtggaaggaatccgatgtcggaaccaacgggctgggcactcccgctgaagtt
cggagcgggatgtgggtgcacggtgccgagcactttgcggccgtgctgagtggcttcacc
tgctacggcctgccgatcctgcaccccctcacccggagggtcgagggcgttctcaacatc
accgtgcacccggacgacgcccatcccctgtttccgcccaccctcacccgggtcgtcgat
gacatcgaacagcgattgatcgacacgtcgcggccggccgattcgcggctgttccgggcc
tttcgagaggcctgcaggaccggccgggccattgtcgcgctcaatgaccacctcatgctg
gccagcaacgccgcggtggcgatggccgaagacctcgacctcgagacgatgcgagagatc
gcccgctctgccgcccaccgagggacgtcaacagtggagtcgctgctcctgctgtccggc
gcgatggtcacggcccggatcgacagactgcacgacttatcgcacggcgcagtgttctgg
cttcgaccgcgctccggcccgcacgctgcgccaggtgcccagcctgcgaatcgcagtcac
ctcgtgagcgccgagcgagcgacatccacagcggtcgccagcgtgttcgtcgaaggtgaa
cccggcagcggcaggagcacggtagcccgatccctcctcgacgggacatcggtcacggtc
atcgacgcactcgactgcctcgtcgaggattccaccgattgggccgggcggcttgcaggt
gtaatagacgggggcgcaggcggacttgtcatcgacaatgtccatgtcctgcccggtcaa
ctggtcgatcttctggcccgcacgctcagcgtcgatcaccacagcatgcccattgttctg
gccggaaatccgcaggcgtggctgcctgctcacgttcagcccttggtccggcgctgtcgc
caagtagtcgcactgaagccgttgcgcgagcggcgcaacgaatttccggtgttggcgcag
tcggtcatagatgctctcgagcctgggcggacacgtcgattggctccgtcagcggtccgc
gttctgaccgcccaaccctggccgggaaacatcccagaactgcgtgaggtcctgcgtcac
gctctcgccaacagaccattcggtgcgctcgaggtagtcgatctacctgctgcctatcgt
gtgcgaccggtgcccgcgctcgcgggccgggagaacgctgagcggcacgcgatcatcgaa
gcactgcgccgcttcgacggcaacaagacgcgggcggcacagttcctcgggatcacccgg
accaccctctacaaccggctacgcgcgctgaagatcaccgatgacaccgtccatttttta
cacagttga
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