Rhodococcus sp. JVH1: JVH1_21065
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Entry
JVH1_21065 CDS
T10360
Name
(GenBank) Ig-like domain-containing protein
Organism
rhoj Rhodococcus sp. JVH1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
YNCE
Big_9
Cytochrom_D1
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
WD40
Cadherin_4
C2_C2CD3_N
LlgE_F_G_D1
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-ProteinID:
XEM90667
LinkDB
All DBs
Position
1:4563459..4567043
Genome browser
AA seq
1194 aa
AA seq
DB search
MIDDKHLKHLGELAVAVGIGLAVAPAGMAVAAPSIGDSSTSSSSDSSDQASSDKTSSDRR
STDRSTDGTSSDRTSSGASGTDSASASGRSGSSTTGDSNTASQSTSGTDTHSTAGTESTS
STSNDEANGSGATTLDTGTPSDPTTPDGSSTADGGGMPDPGTTADESGQVGSSSATTAPD
TIDVSGAAIAPADRPPAGAVAERSDSSSSSAPAQGHDRAPAGSAVAPNPSTTPVTGSFGT
ALAPPAMVEGPAMRGPVPAAPAAIPAAVSAVAPAITTIDGTTALARRVSDAHADAPQVGT
QALAPSLPTPAVDVASSVVSKVLGALGLRPFLSNDPQVPIESPTFWALAAAWCRRQEKAI
TTDASRALAAAPVTTSEPIESVAGTRTSPVATGEPIELFAVASAASTGPSSASTAGPIVY
APDRGTGTVLGSINASGNQLRYEVTGPPSGGTVTVDGTGGFKYTPTQAARQAASAAALNP
AALDPNANYDSFTVTVTDVQSSNQVDVQVQVPVSAARMQEVQSTTVGSNPSGVVFAGTRT
YVANQGSKSVSVLDASNAVVGSVPVGTSPTGVAANPAGTRVYVTNSGSGNVSVIDTATNK
VVTTVTTGTAPNAVAVNPTGTRAYVTNSGSNTLSVIDTATNKVVGTVAVGARPTAVRVSY
DGSAAYVVTDSDRLWVIDTATAKVVSNVGIDSAPEAGAHSIAMSADGTRWRVTDAVDGRV
RALSLTQVNSAPSAASTVGAPSTSDGAVTITLPPDPDGDPVTFTYTAPPSGSVVATGDGA
FVFTPTAAARDLARQSEGPDTDTVTFTVRDGQDVTNVDVTVPVTPAPAAGGFDIDSTSIP
AGGSPTGAVLVGDRLYVVSEDGFVQVVDRDTNTVVGAPITVDWASSNIAAAPAVDRVYVN
SPYTGTISVIDTSTDTVVDTIWLPTSPDYQGYSLAQELAVSPDGTRLYASGEDGTVSVVD
TATNTLVTSQSLGYFTDLAVSEDGRHLYGTSGASVTVIDTESMTRTAEVTVGPVWDLTRS
SSEFTDVVSSVAVNAVGTRAYATYHVSTVELASGGYSNGQFIVDGTGRLWRVTGGYEVVA
VIDVDPSSTTYGTQLATVRLPEGAQDVAISADGDLLYVSGADGRTVSVVDTSTHAVLGTF
VTDPDGSTSGSYGPYRILLVDPDTGGTLYVTDYADGAVYAVTGAPGGAPAAVLT
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgattgacgacaagcatctgaagcacctcggcgagctggcggtggcagtgggcataggg
cttgcggtcgcgccggcgggcatggcggtggcagcaccgtccatcggcgactcgtccacg
tcgtcgagttccgactcctccgaccaggcatcctccgacaagacatcgtccgaccggaga
tccacggaccgatccacggacgggacttcgtcggaccggacgtcatccggcgcatcgggt
accgactcggcctcggcgagcggcagatccggatcgtcgacgaccggcgactcgaacacg
gcttcgcaatccacctccggcaccgatacccactccaccgcgggcaccgaatccacgtcc
tccacctcgaacgacgaggcgaacgggtccggcgcgacgaccctcgacaccggcacgcca
tccgaccccacgacacccgacggctcgtcgacggcggacggcggtggcatgccggatccg
ggcacaacagcagacgagtccgggcaggtcggatcgagttctgccaccacggcaccggac
accatcgacgtgtccggggccgcgatcgcgccggccgaccggcctccggcgggagcagtc
gccgagcgatcggattcgtcctcgtcctcggcacccgcacagggtcacgaccgcgcacct
gcgggcagcgccgttgcgccgaacccatcgaccaccccggtgacgggcagcttcggcacg
gcactcgccccgccggccatggtggagggcccggcaatgcgcggacccgtcccggccgcg
ccggcagcgattccggctgcagtgtcggcggtggctcccgcgatcaccacgatcgacggg
acgacggccctggcgcgccgggtatccgacgcccatgcggacgcgccgcaggtcgggacg
caggcattggccccgtctctgcccaccccggcggtggatgtcgcatccagcgtcgtgtcg
aaggtgctcggcgccctcggtcttcgtccgttcctgtcgaatgacccacaggttccgatc
gagtcgccgacgttctgggcactggccgcggcgtggtgccgtcgacaggagaaggccatc
accaccgacgcgagccgagcgctggctgccgcccccgtcacgaccagcgagccgatcgaa
tcggtcgccggaacacgaacatcccccgttgcgaccggcgagccgatcgaattgttcgcc
gtcgcgagcgccgcatccaccggcccgagctctgcatccactgccgggccgatcgtctat
gcccccgatcgcggcaccggtacggtgctcggctcgatcaatgcgtccggcaaccaactt
cgttacgaggtcaccggaccgccgagcggcggaacggtcaccgtcgacggtaccggcggc
ttcaagtacaccccaacccaggcagcgcgccaggcagcctctgcggccgcgctgaacccg
gccgcgctggacccgaacgccaattacgactcgttcactgtcaccgtcaccgacgtccag
tccagcaaccaggtggacgtgcaggtgcaggttccggtatctgcggcacggatgcaggaa
gtgcagtccaccactgtcgggtccaacccgtccggtgtggtgttcgccggcaccagaacc
tatgtggcaaaccagggttcgaagagcgtctccgtgctcgacgcaagcaacgccgtcgtc
ggctcggtgcccgtcggcacctcgccgaccggcgtcgcggccaacccggccgggacccgg
gtgtacgtgaccaacagcggcagcggcaacgtgtcggtgatcgacaccgccaccaacaag
gttgtcaccaccgtcacgaccggcaccgcacccaacgccgtcgccgtcaaccccaccggc
acccgcgcgtacgtcaccaacagcggcagcaacaccctctcggtcatcgacaccgccacc
aacaaagtcgtcggcaccgtggccgtcggggctcggccgaccgccgtgcgtgtcagctac
gacggcagcgccgcgtacgtcgtgaccgactcggatcggttgtgggtgatcgacaccgcg
accgccaaggtggtgtcgaatgtcggtatcgactcggcccccgaggccggcgcgcacagc
atcgccatgagcgccgacggcactcggtggcgtgtgaccgacgcagtcgacgggcgggtg
cgggcactgtctctcacccaggtcaactccgcgccatccgcggcatcgacggtcggcgct
cccagcacgtccgacggcgcggtcacgatcacgctcccgcccgaccccgacggcgacccc
gtgaccttcacctacaccgcaccaccgtccggttccgtcgtcgccaccggggacggggcg
ttcgtcttcaccccgaccgccgccgcccgcgacctcgcccgacagtcggagggaccggac
accgacacggtcaccttcaccgtcagagacggccaggacgtgaccaacgtcgatgtcacc
gtcccggtcacgccggcgcctgccgcgggcgggttcgacatcgactcgacatcgatcccg
gcgggaggcagcccgaccggcgcggttctcgtcggcgaccggctgtacgtcgtgagcgag
gacggcttcgtgcaggtcgtcgaccgcgacaccaacacggtcgtcggtgcgccgatcacg
gtcgactgggcgtcgtcgaacatcgcggccgccccggcggtcgaccgcgtgtacgtcaac
agtccctataccggcaccatctcggtgatcgacacgagcaccgacaccgtcgtcgacacg
atctggctgcccacctcccccgactaccaggggtattccctggcgcaggagttggccgtc
agccccgacgggacgcgcctctacgccagcggtgaggacggcacggtgtcggtggtcgac
actgcaacgaacaccctcgtgacctcgcagtccctcggatacttcaccgatctggccgtc
agcgaggacggccgtcacctgtacggcacgagcggtgcgtccgttaccgtgatcgacacc
gagtccatgaccaggacggcggaggtcaccgtcgggccggtgtgggacctcacccgctcg
agcagcgagttcaccgatgtcgtcagcagtgtcgctgtcaacgcggtcggcacccgggcc
tatgccacgtaccacgtcagcacggtggagctcgccagcggcggctactccaacggacag
tttatcgtcgacggcaccggacggctctggcgtgtgacgggcggatacgaggtcgtcgcg
gtgatcgacgtcgacccgtccagtaccacctacgggacccagctcgcgacggtccggctg
cccgagggagcacaagacgtggcgatcagcgcggacggcgatctgctgtatgtctccggc
gcggacggccggaccgtctcggtggtcgacacctcgacacacgccgtgctcgggaccttc
gtgaccgacccggacggctcgacctccggatcgtatggaccctaccgaatcctgctcgtc
gatccggacaccggcggaacgctgtacgtgaccgactacgccgacggcgccgtgtatgca
gtcaccggcgcaccgggcggcgcacccgccgctgtactcacctaa
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