Rhodococcus sp. JVH1: JVH1_21310
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Entry
JVH1_21310 CDS
T10360
Name
(GenBank) IS3 family transposase
Organism
rhoj Rhodococcus sp. JVH1
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Gene cluster
GFIT
Motif
Pfam:
rve
rve_3
HTH_21
HTH_Tnp_1
rve_2
HTH_23
HTH_28
HTH_AsnC-type
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
XEM93880
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Position
1:complement(join(4609250..4610217,4610217..4610469))
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AA seq
406 aa
AA seq
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MGRQSLYTEEFRKDAVALYRAADGKRTYAAVAADVGVSGETLRTWVRKDTARNARSQDRS
TGADGTEADELARLRAENARLRGAGKGMAARTRDSAPGSRVFRKGGEVKTRRWDFISDHR
AEFGVQRLCRVLGTSRSAYYKHLITEPARVERQAEEAATVAEIRAIHTEHRSAYGAPRVH
AELRSRGRRINRKRVTRLMRIHHVVGRHLRRSKRTTIADKSAPSVPDLVMRDFTATAVDT
KWCGDITYIPVGSSWLFLATVIDIFSRRVVGWSIADHMRTDLVTDAIEMAVRTRGGDVGG
VIFHSDRGSQYTAAAFVDVCRRHGIQQSRGRVGSSYDNALAESFFQGLKREWLHGRSWTS
KSQARLELFEWLSYFNRRRRHSALGYLTPVEFEQRLIASSTLSVAA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
gtgggacgccagtctctgtacacggaggaattccggaaagacgcggtcgcgttgtatcgc
gcggccgacggcaaacgcacgtacgcggcggtggccgcggatgtgggcgtcagtggcgaa
acgctacggacgtgggtccgcaaggacaccgcccgtaacgcgcgctcgcaggaccgcagt
accggcgccgacgggaccgaggcggacgagctcgcgcggctgcgcgcggagaatgcgcgg
ctgcgcggtgcgggaaaaggaatggcagctcgaacgcgagattctgcgccgggcagccgc
gtatttcgcaaaggaggtgaagtgaagacccgccgctgggacttcatctccgaccatcgc
gccgagttcggcgtgcagcggctgtgccgggtgctcgggacctcccgttccgcctactac
aagcacctgatcacggagccggcccgtgtcgagcgccaggccgaggaagccgcgacagtc
gccgagatccgcgcaatccataccgagcaccggagcgcctacggcgctccgcgggttcac
gccgaactccgctcccgcgggcgcaggatcaaccgcaaacgggtgacccggctgatgcga
atccaccacgtggtgggcaggcacctgcgccgcagcaagcgcacgaccatcgcggacaag
tcggctccgtcggtgccggatctggtgatgcgagacttcaccgctacggctgtcgatacc
aagtggtgtggggacataacctacatcccggtgggatcctcgtggttgttcttggccacg
gtgatcgacatcttctcacgccgggtggtgggctggtcgatcgctgaccacatgcgcacc
gatctcgtcacggacgcgatcgagatggcggtgcgcacccgcggtggtgacgtcggtggc
gttatcttccacagcgaccgcggatcacagtacaccgcagcagctttcgtcgatgtatgc
cgccgtcatgggattcagcaaagtcgaggacgggtcgggtcaagttacgataatgctctc
gccgagtcgttcttccaaggactcaagagggagtggctgcacggacggagttggacgtcg
aagtcgcaggcacggctggagttgttcgagtggctctcgtacttcaatcgacgtcgccgt
cactccgccctcggatacctcaccccagtggagttcgaacaacgactcatcgcgtcgtct
acgctgtcagtcgccgcatga
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