Rhodococcus sp. JVH1: JVH1_22330
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Entry
JVH1_22330 CDS
T10360
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rhoj Rhodococcus sp. JVH1
Pathway
rhoj00260
Glycine, serine and threonine metabolism
rhoj00460
Cyanoamino acid metabolism
rhoj00630
Glyoxylate and dicarboxylate metabolism
rhoj00670
One carbon pool by folate
rhoj00680
Methane metabolism
rhoj01100
Metabolic pathways
rhoj01110
Biosynthesis of secondary metabolites
rhoj01120
Microbial metabolism in diverse environments
rhoj01200
Carbon metabolism
rhoj01230
Biosynthesis of amino acids
rhoj01240
Biosynthesis of cofactors
rhoj04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JVH1_22330 (glyA)
09102 Energy metabolism
00680 Methane metabolism
JVH1_22330 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JVH1_22330 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JVH1_22330 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JVH1_22330 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JVH1_22330 (glyA)
Enzymes [BR:
rhoj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JVH1_22330 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
XEM90891
LinkDB
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Position
1:complement(4840192..4841460)
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AA seq
422 aa
AA seq
DB search
MSVLNRDLADFDPDVAALIGKELERQRTGLEMIASENHAPLSVMQAQGSVLTNKYAEGYP
GRRYYGGCEHVDTIEQLAIDRVKALFAAEYANVQPHSGATANASVMHALIEPGDTILGLS
LADGGHLTHGMRLNFSGKLYNVAAYGVSEQDYLIDMDEVAKAAREHRPQLIIAGWSAYPR
HLDFARFREIADEVGAYLMVDMAHFAGLVATGFHPSPVPHAHVVTSTTHKTLGGPRGGII
LTGDAAIAKKINSAVFPGQQGGPLEHVIAGKATAFKMAAEPEFAERQERCLDGAKVLAER
LSRPDVKEAGISVLTGGTDVHLVLVDLRDAAIDGQQAEDRLDAIGITVNRNAVPFDPRPP
MVTSGLRIGTPALAARGFGRDDFATVADLIAQALVAPADADTSGLAAQVRALADKYPLYP
GL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcctgaaccgcgacctcgcggatttcgacccggacgtcgccgcactgatcggc
aaggagctggagcgccagcgcaccggcctcgagatgatcgcgtcggagaaccacgccccg
ctttcggtgatgcaggcgcagggttccgtgctgaccaacaagtacgccgagggctacccc
gggcggcgctactacggcggctgcgagcacgtcgacacgatcgagcagctcgccatcgat
cgcgtcaaggcgctgttcgccgccgaatacgccaacgtgcaaccgcattccggcgccacc
gcgaacgcgtcggtgatgcacgcgctgatcgagccgggcgacacgatcctcggactgtcc
ctcgccgacggcggccacctcacgcacggcatgcgcctcaacttctccggcaagctctac
aacgtcgccgcctacggggtgtccgaacaggactacctcatcgacatggacgaggtggcg
aaggcggcacgcgagcaccggccgcagctgatcatcgccggctggtcggcctacccccgg
cacctggacttcgcccgcttccgggaaatcgccgacgaggtcggcgcctacctgatggtc
gacatggcccacttcgcgggtctggtcgccaccggattccacccgtctcccgtcccgcac
gcacacgtcgtcacgtcgacgacgcacaagaccctcggcggaccccgcggcggcatcatc
ctgacgggcgacgccgccatcgcgaagaagatcaactccgcggtgttccccggccagcag
ggcggcccactggaacacgtgatcgcgggcaaggcaacggcattcaagatggcggccgaa
cccgaattcgcggagcgtcaggaacgctgcctggacggcgcgaaggtgctcgccgaacgg
ctcagccgacccgacgtcaaggaagccggaatcagcgtcctcaccggcggcaccgacgtg
cacctcgtcctcgtcgacctgcgggatgccgccatcgacgggcagcaggccgaggaccgc
ctcgatgcgatcggaatcaccgtcaaccgcaacgccgttccgttcgatccacggccgccg
atggtgacgtccggtctgcgtatcggcaccccggcactcgccgcccgcggcttcggccgg
gacgacttcgcgaccgtcgccgacctgatcgcccaggccctcgtcgcgcccgccgacgcg
gacacgtccgggttggccgcccaggtccgggcgctcgcggacaagtacccactctatccg
gggctgtaa
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