Rhodococcus sp. JVH1: JVH1_22345
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Entry
JVH1_22345 CDS
T10360
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
rhoj Rhodococcus sp. JVH1
Pathway
rhoj00260
Glycine, serine and threonine metabolism
rhoj00630
Glyoxylate and dicarboxylate metabolism
rhoj00670
One carbon pool by folate
rhoj00785
Lipoic acid metabolism
rhoj01100
Metabolic pathways
rhoj01110
Biosynthesis of secondary metabolites
rhoj01200
Carbon metabolism
Module
rhoj_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JVH1_22345 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JVH1_22345 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JVH1_22345 (gcvP)
00670 One carbon pool by folate
JVH1_22345 (gcvP)
Enzymes [BR:
rhoj01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
JVH1_22345 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
XEM93889
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Position
1:complement(4843012..4845891)
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AA seq
959 aa
AA seq
DB search
MPLTSNFPSRHIGPDAAASRRMLDALGYDSLANLIDSAVPDQIRSSQPLNLPAARSEQQV
LADLRALSERNETRVQMIGLGYSDTITPAVLRRNMLESPAWYTAYTPYQPEISQGRLEAL
LTFQTVIEDLTALPLAGASLLDEATAVMEAVLLMRRANKSKSATNRVVLDADCLPQTLAV
VRGRAKAVGIEVVVAELSGELPSGDMFGVVFQAPGASGAVRNLAPMIAAAKARGALTTVA
ADLLSLTILTPPGEQGADIAVGSAQRFGVPLFFGGPHAGYMAVRSGLERMLPGRLVGVSV
DVDGKTAYRLALQTREQHIRRDKATSNICTAQALLANVAAMYAAYHGPEGLRAIANRVHT
HATTIAGSLRAAGHTIVHDSFFDTVLVRVPAGAGAIVESADRDGINLRLVDADHVAIACD
ECTTDAIVRRVVAVFGAQPTTVAVPELPSALARTSKYLQHPVFHDHRSETAMLRFLRTLS
DKDLALDRTMIPLGSCTMKLNSAVEMEPISWPGFASIHPYAPVAQTAGYLELVADLERWL
GEITGYDRVSLQPNAGSQGELAGLLAIHGYHESRGDFGRNVCLIPQSAHGTNAASAVLAG
MKVVVVATAENGNIDVGDLRAKIAAHEGAIAAIMLTYPSTHGVYENDVRTVCDLVHEAGG
QVYVDGANLNALVGLAQPGKFGGDVSHLNLHKTFCIPHGGGGPGVGPVAVREHLAPFLPG
NPLGDDDLGTPVSAANYGSAGILPITWAYIALMGPDGLTSATETAVLAANYVAQSLDRHF
PVLYTGPSGLVAHECILDLRPVTKATGVTAEDVAKRLIDYGFHAPTLSFPVNGTLMVEPT
ESEDLAELDRFIEAMVSIRREIDLVGDGVWPLERSPLRQAPHTAEQVTADEWDLPYPRHL
AAYPVASLRAAKYWPPVRRIDGVHGDRNLVCSCPAPEAFENTTDIDTSAIAETPEEAFA
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
gtgcccctcaccagcaactttccgtcccgccacatcggtcctgacgccgccgcgtcacgg
cggatgctcgacgccctcggttacgacagcctcgcgaacctgatcgacagcgcggtgccg
gaccagatccgcagctcacagcccttgaatctgcccgcggcgaggtccgagcagcaggtt
ctcgccgatctgcgggcactgtcggagcgcaacgagacccgcgtccagatgatcggcctc
gggtactccgacaccatcactcccgcggtgttgcggcggaacatgctcgagtcccccgcc
tggtacacggcctacaccccgtaccagccggagatctcccagggcaggctggaggcgctg
ctgacgttccagaccgtcatcgaggatctgaccgcccttcccctggccggcgcgtcgctg
ctcgacgaggcgaccgccgtgatggaggcggtactgctgatgcggcgtgcgaacaagtcg
aagtccgccaccaaccgcgtcgtcctcgacgcggactgcctgccgcagacactggccgtc
gtccggggacgggcgaaagcagtgggcatcgaggtggtggtcgcggaactgtccggggaa
ctgcccagcggtgacatgttcggggtggtcttccaggcgcccggtgcgagcggcgcggtg
cgcaacctggctccgatgatcgccgcggcgaaggcgcgcggcgccctgaccaccgtcgcg
gcggacctgctgtcgctgacgattctgacaccgcccggcgagcagggcgccgacatcgcc
gtcgggtcggcgcagcgattcggtgtgcccctgttcttcggcggaccgcacgccggctac
atggccgtgcgcagcgggctcgagcgcatgctgcccggccgtctcgtcggagtgtccgtc
gacgtcgacgggaagaccgcctaccggctggctctgcagacccgcgaacagcacatccgg
cgtgacaaggcgaccagcaacatctgcacggcgcaggcgctgctcgcgaacgtcgccgcg
atgtacgccgcctaccacggtccggaggggttgcgcgccatcgcgaatcgggtgcacacc
cacgcgacgaccatcgcaggaagcctgcgcgccgccggtcacacgatcgtgcacgacagc
ttcttcgacacggttctcgtgcgggtcccggcgggtgccggggcgatcgtggagtcggcc
gatcgggacggcatcaacctccgtctcgtcgacgccgatcacgtcgcgatcgcctgcgac
gagtgcaccaccgacgccatcgtccggcgggtggtcgccgtgttcggtgcgcagccgacg
accgtcgcggtgcccgaactgccgtcggcactcgccaggacgtcgaaatacttgcagcac
cccgtgttccacgatcaccgctccgaaaccgcgatgctccgcttcctgcgcacgctgtcg
gacaaggacctcgcgctcgaccgcaccatgatcccgctcggatcgtgcacgatgaaattg
aactccgctgtcgagatggaaccgatcagctggcccggattcgcgtccatccacccgtac
gccccggtcgcgcagacggcgggctacctcgaactcgtcgccgacctggaacgctggctc
ggcgagatcaccggctacgatcgggtgtcgttgcagcccaatgccggatcccagggcgag
ctggccggcttgctcgcgatccacggctatcacgaatcccgcggcgacttcggacgcaac
gtctgcctcatcccccagtccgcgcacggcaccaacgccgcatccgcggttctcgcgggc
atgaaggtcgtcgtcgtcgcgaccgcggagaacggcaacatcgacgtgggtgacctgcgc
gcgaagatcgcggcgcacgagggcgcgatcgccgcgatcatgttgacctacccgtccact
cacggcgtgtacgagaacgacgtgcggacggtctgcgatctggtgcacgaggccggcggg
caggtgtacgtcgacggcgcgaacctcaatgcgctggtcggcctcgcacagccaggcaag
ttcggcggcgacgtctcacacctgaacctgcacaagacgttctgcatcccacacggcggc
ggcggtcccggtgtcgggcctgtcgcggtgcgcgagcatctggcgccgttcctgcccggt
aatccgctgggcgacgacgacctcggcaccccggtgtcggcggccaactacggatcggcc
ggaatcctgcccatcacgtgggcgtacatcgcgctgatgggtccggacgggctgacgagc
gccaccgaaaccgcggtgctcgcagccaattacgtcgcccagtcactggatcggcatttc
ccggtcctctacaccggcccgtccggtctggtggcacacgagtgcatcctcgacctccgg
cccgtcaccaaggcgaccggcgtcaccgccgaggatgtcgcgaagcggttgatcgactac
ggcttccacgcgcccaccctgtcgttccccgtcaacggcaccctgatggtcgaaccgacc
gagtccgaggacctggccgaactcgaccgcttcatcgaggcgatggtgtccatccgccgc
gagatcgacctggtcggcgacggcgtgtggccgctcgagcgcagcccgctgcgtcaggcc
ccgcacaccgccgaacaggtgaccgcggacgaatgggatctgccctacccgcgccacctc
gccgcctaccccgtcgcgtcgcttcgcgccgccaaatactggcccccggtgcgtcgcatc
gacggcgtccacggcgaccgcaacctcgtctgctcgtgcccggcacccgaggccttcgag
aacaccaccgacatcgacacttcggccatcgccgagacccccgaggaggccttcgcatga
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